Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0212 ATGTTGTTTTCTTTGTCTTCTTCCACTTCACTCATGAACCTTGCTACTGATTTTGATTTTCTTCTCAAACCCATTTTCCTTCATGGGTTGTCTAGTGTTCTTCATATACTGTTGCTAGTAGGGGTTTTGGTTTCATGGGTTTGGAAAAGGGTTGTAGCTGGTGTTGGGAGTGTTGGGAATGAGACTAAGGAGGAGAAACCAAATAGTAGTTTGTTTAAAGTGACAAAGTTTTGTTCTGTTGGTTTTTCTTCTTTCAATTTTGTTCTTTTTCTTGTTAATTATTTCTACTGGTATACTAGTGGTTGGTCAGAAGAAAAGCTTATTACCCTTATTGATTTAGCTTTGAAAACAGTTGCTTGGTGTGTTGTTTGTGTTTGCTTTCATAAAGGGTTCTTATTTTTCTTCAGTTCAAGTCAGAGAAAAAGTAGGTTTCCAGTTTTCTTCAGAGCTTGGTGTGTCTTCTATCTCTTTGTTTCATGTTATTGCTTTGTGGTTGACATTGTTGTTTTGTATGAAAATCGCGTTGAGTTAACTGTTCCATGCATTGTTTCTGATGTGGTTTCGGTTTGTGTTGGGTTGTTCTTTTATTATATCGGGTTTTGTGTGAAAAATGAGAGTGGAGAAGAAGGTGATAGAACTCTTCAAGAACCTCTTTTGAATAGTGATCCACATATTGGTAATGGTAATGGTGATGTCTTGGAGTTAAAAGAGACTAAAGGGGGTGACACTCTTACCCCTTATTCAAATGCTGGAATTTTGAGCCTGCTCACTTTCACATGGGTGGGTCCATTGATAGCATTCGGCAATAAGAAAATCTTAGACCTTGAGGATATTCCTCAGCTAGATAGTGGAGATAGTGTGGTTGGAGCTTTTCCAACTTTTTGTGAAAAACTTGAAGCTGATTGTGGTGAAGTCAATAGAGTAACCTCGCTTAAGTTGGTTAAGTCATTAATAATCTCAGGGTGGAAAGAGATTCTTTTCACTGCTTTTCTTGCACTTTTAAACACTCTTGCTAGTTATGTCGGCCCTTATCTTATCGATTCTCTTGTTCAATATCTTGATGGAAAAAGGCTTTATGAGAATCAAGGCTACGTGTTGGTTTCTGCATTTTTCTTTGCAAAGGTTGTAGAATGCTTTACACAAAGGCATTGGTTCTTTAGGTTGCAGCAACTCGGACTTCGTATCCGAGGACTGCTCGTGACGATGATATATAAAAAAACGTTAACACTTTCGTGTCAATCAAGGCAATGTCACACTTCTGGAGAAATAATCAATTTCATGACAGTTGATGCTGAAAGAGTTGGTATATTCAGTTGGTACATGCATGATATGTGGTTAGTAGTTTTGCAAGTCACATTGGCGTTGTTGATTTTGTATAAAAACCTTGGACTTGCTTCAGTTGCTGCTTTTGTTACAACCATCATTGTTATGTTGGCAAATGTTCCGTTAGGATCGTTACAAGAGAAGTTTCAAAAAAAGTTGATGGAGTCGAAGGATACAAGAATGAAGACGACGTCTGAAATTTTAAGGAACATGAGGATCCTTAAACTGCAAGGATGGGAAATGAAGTTTCTATCTAAAATAACCGAGCTCAGAGATACGGAACAAGGCTGGTTGAAAAAGTTTCTTTATACTTCAGCCATAACTACATTTGTCTTTTGGGGTGCACCTACATTAGTATCCGTGGTTACTTTCGGTACTTGTATGCTTATAGGAGTCCCACTTGAATCCGGGAAGATTCTGTCAGCACTTGCAACAATCAGGATTCTTCAAGAGCCTATTTATAATCTTCCAGATTTAATTTCAATGATAGCACAAACTAAAGTTTCTGTTGATAGGATCTCGTCGTTCCTTCGTCTCGAAGACTTGCAGTCTGATGTTGTAGAAAGGCTTCCTCGGGGTAGTTCTGATACGGCAATTGAAGTGGACGATGGGAATTTTTCATGGGATTTATCTTTGCCTAATCCAACTTTACAGAACTTAAATCTCAAAGTTTTTCATGGTATGAAGGTTGCGGTTTGTGGTACTGTTGGATCAGGCAAATCTACTTTACTCTCTTGTCTACTCGGAGAAGTTCCAAAGATATCGGGTACCATTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAATCGCCTTGGATTCAAAGTGGTAAGATAGAGGATAATATATTGTTTGGTGAACAAATGGTTAGGGAAAGGTACGAGAAGGTACTTGAAGCGTGTTCCTTGAAGAAGGATTTGGAAATCTTGTCATTTGGTGATCAAACGGTTATAGGCGAACGTGGGATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGCGCTCTTTACCAAGATGCTGATATCTATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTTTTCAAGGAATGCTTGCTGGGTGTTTTAAGTTCGAAAACAGTTGTTTATGTTACTCATCAAGTGGAGTTCTTACCTACTGCCGATCTTATATTGGTCATGAAAGATGGAAAAATAACTCAGAGTGGAAAGTATGCTGATTTGCTTAACATTGGAACCGATTTTATGGAACTTGTTGGTGCACATAGAGAAGCTTTGTCTACACTTGAATCATTGGGTGAGGGAAAAACATCTAATGAAATAAGTAAGTTAGAACCAGAAGTAAATATCTCCGGCACCGGCACTCACGAAGAGGTAAACAAAAATGAGCAAAATGGTAAAGCAGATGATGATACAGGCGAACCGAAAGGCCAACTCGTTCAAGATGAAGAAAGAGTGAAAGGGAAAGTTGGGCTTTCAGTTTATTGGAAGTATATCACAACTGCATATGGAGGAGCTCTCGCACCGTTCATAATATTGGCTCAGATTTTGTTTCAAACTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAATCTCAGCAGATGTAGAGCCACCTGTTAAAGGAACAACTCTTATTGAAGTCTATGTTGGTTTGGCCATTGGAAGTGCTTTATGCATTCTTGTTAGAGCATTGTTACTTGTTACATTCGGCTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTGGCCATTTTTCGCGCCCCGATGTCGTTTTTTGATTCTACTCCAAGTGGCCGAATCCTTAATAGAGCTTCAACTGATCAAAGTGCAGTGGATATAGACATTCCTTATCAAGTTGGCTCATTTGCCTTCTCTTTGATCCAGCTTCTAGGAATTATAATAGTGATGTCTCAGGTTGCATGGCAAGTTTTCATCGTCTTTATACCCGTGATAGCAATTAGCATTCACTATCAGCGATTCTATTTACCATCAGCGCGTGAACTATCACGTTTATGTGGAGTATGCAAAGCTCCTATCATTCAACACTTTGCGGAAACAATTTCCGGTACTTCAACCATTAGAAGCTTTGATCAAGAGTCAAGATTTCATGCAGCAAACATGAAACTGACGGATGGCTATAGTCGGCCAAAGTTCAATATTGCTGCTGCTATGGAATGGTTATGCATCCGCCTAGATATGTTGTCTTCCATCACATTTGTCTTTTCCTTGATGTTCTTGATTTCAATTCCACCTGGAATCATAAATCCAGGCCTTGCTGGTCTAGCTGTTACCTATGGACTGAATTTAAACCAAATACAAGCTTGGGTGATATGGAATATTTGCAACTTGGAGAACAAAATTATATCTGTAGAAAGGATACTTCAATATACAAGCATTCAAAGTGAGCCTCCCCTTGTTTTAGAAGAAGAAAATAGGCCAGATCCTTCATGGCCCGCAAATGGCGAGGTTGATATTCGAAACTTGCAGGTTCGATATGCTCCACATCTTCCGCTCGTGTTGCGTGGCCTGACATGCACGTTTCGTGGAGGATTGAAAACCGGCATTGTTGGAAGAACAGGAAGTGGCAAATCAACTCTTATACAAACACTTTTCCGACTCATTGAGCCTACTGCCGGGGAAGTTATCATTGACAGCATCAACATCTCTGCAATTGGACTGCATGATCTGAGGTCTAGACTAAGCATCATTCCGCAGGATCCAACAATGTTCGAGGGAACTGTGAGAAGTAATCTGGACCCTCTCGAAGAGTACAACGATGATCAAATATGGGAGGCTTTGGATAAGTGTCAACTCGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCGTCAGTTACCGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAATTGGTTTGCCTTGGTAGGGTTCTGCTTAAGAAGAGCAAAATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTGATTCAACAAACTCTTAGGAAGCATTTCACTGACTCTACCGTCATTACCATCGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTGATCAAGGACTTATTGAGGAGTATGACTCACCAACGACATTGCTAGAAGATAAGTCATCCTCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCCAATTTTGAGTAA 4548 0.3958 MLFSLSSSTSLMNLATDFDFLLKPIFLHGLSSVLHILLLVGVLVSWVWKRVVAGVGSVGNETKEEKPNSSLFKVTKFCSVGFSSFNFVLFLVNYFYWYTSGWSEEKLITLIDLALKTVAWCVVCVCFHKGFLFFFSSSQRKSRFPVFFRAWCVFYLFVSCYCFVVDIVVLYENRVELTVPCIVSDVVSVCVGLFFYYIGFCVKNESGEEGDRTLQEPLLNSDPHIGNGNGDVLELKETKGGDTLTPYSNAGILSLLTFTWVGPLIAFGNKKILDLEDIPQLDSGDSVVGAFPTFCEKLEADCGEVNRVTSLKLVKSLIISGWKEILFTAFLALLNTLASYVGPYLIDSLVQYLDGKRLYENQGYVLVSAFFFAKVVECFTQRHWFFRLQQLGLRIRGLLVTMIYKKTLTLSCQSRQCHTSGEIINFMTVDAERVGIFSWYMHDMWLVVLQVTLALLILYKNLGLASVAAFVTTIIVMLANVPLGSLQEKFQKKLMESKDTRMKTTSEILRNMRILKLQGWEMKFLSKITELRDTEQGWLKKFLYTSAITTFVFWGAPTLVSVVTFGTCMLIGVPLESGKILSALATIRILQEPIYNLPDLISMIAQTKVSVDRISSFLRLEDLQSDVVERLPRGSSDTAIEVDDGNFSWDLSLPNPTLQNLNLKVFHGMKVAVCGTVGSGKSTLLSCLLGEVPKISGTIKVCGTKAYVAQSPWIQSGKIEDNILFGEQMVRERYEKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGVLSSKTVVYVTHQVEFLPTADLILVMKDGKITQSGKYADLLNIGTDFMELVGAHREALSTLESLGEGKTSNEISKLEPEVNISGTGTHEEVNKNEQNGKADDDTGEPKGQLVQDEERVKGKVGLSVYWKYITTAYGGALAPFIILAQILFQTLQIGSNYWMAWATPISADVEPPVKGTTLIEVYVGLAIGSALCILVRALLLVTFGYKTATILFNKMHLAIFRAPMSFFDSTPSGRILNRASTDQSAVDIDIPYQVGSFAFSLIQLLGIIIVMSQVAWQVFIVFIPVIAISIHYQRFYLPSARELSRLCGVCKAPIIQHFAETISGTSTIRSFDQESRFHAANMKLTDGYSRPKFNIAAAMEWLCIRLDMLSSITFVFSLMFLISIPPGIINPGLAGLAVTYGLNLNQIQAWVIWNICNLENKIISVERILQYTSIQSEPPLVLEEENRPDPSWPANGEVDIRNLQVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRLIEPTAGEVIIDSINISAIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYNDDQIWEALDKCQLGDEVRKKEGKLDSSVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHFTDSTVITIAHRITSVLDSDMVLLLDQGLIEEYDSPTTLLEDKSSSFAKLVAEYTMRSNSNFE* 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0212 1515 SMART AAA_5 1296 1481 IPR003593 -
Psa2g0212 1515 SMART AAA_5 667 840 IPR003593 -
Psa2g0212 1515 Gene3D ABC transporter type 1, transmembrane domain 304 620 IPR036640 GO:0005524|GO:0016021
Psa2g0212 1515 Gene3D ABC transporter type 1, transmembrane domain 914 1250 IPR036640 GO:0005524|GO:0016021
Psa2g0212 1515 SUPERFAMILY ABC transporter transmembrane region 317 622 IPR036640 GO:0005524|GO:0016021
Psa2g0212 1515 SUPERFAMILY ABC transporter transmembrane region 952 1251 IPR036640 GO:0005524|GO:0016021
Psa2g0212 1515 MobiDBLite consensus disorder prediction 880 901 - -
Psa2g0212 1515 Pfam ABC transporter transmembrane region 953 1193 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa2g0212 1515 Pfam ABC transporter transmembrane region 326 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa2g0212 1515 Pfam ABC transporter 1288 1435 IPR003439 GO:0005524
Psa2g0212 1515 Pfam ABC transporter 658 792 IPR003439 GO:0005524
Psa2g0212 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 952 1232 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa2g0212 1515 Gene3D - 621 882 IPR027417 -
Psa2g0212 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 863 IPR003439 GO:0005524
Psa2g0212 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1272 1504 IPR003439 GO:0005524
Psa2g0212 1515 MobiDBLite consensus disorder prediction 902 920 - -
Psa2g0212 1515 CDD ABCC_MRP_domain1 640 840 - -
Psa2g0212 1515 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Psa2g0212 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1261 1499 IPR027417 -
Psa2g0212 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa2g0212 1515 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 113 1515 - -
Psa2g0212 1515 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524
Psa2g0212 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 113 1515 - -
Psa2g0212 1515 CDD ABC_6TM_ABCC_D2 952 1244 IPR044726 GO:0140359
Psa2g0212 1515 MobiDBLite consensus disorder prediction 880 920 - -
Psa2g0212 1515 CDD ABCC_MRP_domain2 1268 1488 - -
Psa2g0212 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 862 IPR027417 -
Psa2g0212 1515 Gene3D - 1252 1506 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0212 Psa-Chr2 7934475 7940189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0212 640 870 Calmodulin-binding Proteins AT2G36910 30.315 6.23e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0212 - K05666 gmx:100777836 2390.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0212 2 7934475 7940189 Psa2g0212 2 7934475 7940189 ECH