Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0205 ATGCATACATTTTTAACTCTCCACCCTTACAATCCCTTCCACTTTCTTCTAAATTCTTCATCTAAATGCCCTTTTCATTCTTCGTTTTCGAAACGAATCACCTTCACTGTGCTTTCTACTCATTCAAATCCTAATATTATCAAAACCAACGGAAGATCAACCTATGATAAACCCCTCTTACCGTACGAGTATGATGAAGAACTGTACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGATGATTTGTTCTCTGATGATGAATTTGCCGAGTCTGCTGATTTTGATGCTAAAGACAAGAAATCGAAATCTAAGACACTGGCAGGTAGACATCAGGAAAATGAATGGGGTGTGAAATCTCTTAACAATGGACAAAGTAGTAAATTGTCCAAAAGTCAGAGAATAGCATCCTTACAACAAAATAACAGTAGAAAGTTTGGTAGAAATTCAATGGTGGAAAGATATCCAGAGCTGTCTGAAAAGATTGATTTGCATGTGAAATGGTTACCACTTCTTGATTACTTAAGCACGTTTGGAATTAACGAATCGCAGTTGGTCCAAATTTATGCGAAGCACAAGTCATCGTTTCAAGTGAATGTATGTTCTGCACAGGAAAGGTTAGATTACTTAATGAGTCTTGGAGTTAAACATAAGGATATAAGAAGAATCCTCTTGCGGCAACCACAGGTTATCAGTTACACTGTGGAGAACAATTTGAAGACACATGTAGCTTTCTTAATGAGCTTGGGCGTACCTAGTTCCAAAATAGGGAAAATTATTGCTGTTACTCCGTCCCTTTTATCTTACAGTGTTGAGAAATCATTAAAACCAACGGTGAGATATTTAATTGAGGAAGTTGGTATCAATGAAAAAAATTTGGGTAAAGTCATTCAACTGAGCCCTCAGATTCTAGTCCAGAGTATTGACATTTCGTGGAATATTCGACTTATTTTCTTTACCAAAGAGTTGGGTGCGTCAAAAGAGAGCATTGTGAAGATGGTGACGAAACACCCCCAGCTTCTCAATTACAGCATTGATGACGGATTGCTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAACGGCGACATCTTGAAAATCTTGACTAGCCTTACGCAGGTGCTATCGCTCTCCTTGGAGGCTAATCTAAAGCCGAAGTATTTGTATTTAGTTAATGAACTTCACAATGAGGCACAATCTTTGACCAAATACCCTATGTACCTAAGCTTGTCTTTAGAACAGAGAATTCGCCCTCGCCACAGGTTCTTAGTTTCACTAAAGAAAGCTCCCAAAGGGCCATTTCCTCTAGGATCTCTAATTCCAACTGATGAAAGCTTTTGTCAAAAATGGGCTGGAACTACTCTTGATAAATATATGGCATTTCGCCAGAGATCGTCGCTCAATAATCTAGCTGAGAAATATAACAGAAAAAAGTGA 1446 0.3804 MHTFLTLHPYNPFHFLLNSSSKCPFHSSFSKRITFTVLSTHSNPNIIKTNGRSTYDKPLLPYEYDEELYEEEEEEEEEEDDDDLFSDDEFAESADFDAKDKKSKSKTLAGRHQENEWGVKSLNNGQSSKLSKSQRIASLQQNNSRKFGRNSMVERYPELSEKIDLHVKWLPLLDYLSTFGINESQLVQIYAKHKSSFQVNVCSAQERLDYLMSLGVKHKDIRRILLRQPQVISYTVENNLKTHVAFLMSLGVPSSKIGKIIAVTPSLLSYSVEKSLKPTVRYLIEEVGINEKNLGKVIQLSPQILVQSIDISWNIRLIFFTKELGASKESIVKMVTKHPQLLNYSIDDGLLPRINFLRSIGMKNGDILKILTSLTQVLSLSLEANLKPKYLYLVNELHNEAQSLTKYPMYLSLSLEQRIRPRHRFLVSLKKAPKGPFPLGSLIPTDESFCQKWAGTTLDKYMAFRQRSSLNNLAEKYNRKK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0205 481 MobiDBLite consensus disorder prediction 96 113 - -
Psa2g0205 481 MobiDBLite consensus disorder prediction 117 142 - -
Psa2g0205 481 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 26 472 - -
Psa2g0205 481 SMART mt_12 368 400 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 SMART mt_12 332 363 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 SMART mt_12 295 327 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 SMART mt_12 258 290 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 MobiDBLite consensus disorder prediction 96 142 - -
Psa2g0205 481 Gene3D Transcription termination factor 3, mitochondrial 232 467 IPR038538 -
Psa2g0205 481 Pfam mTERF 151 248 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 Pfam mTERF 151 429 IPR003690 GO:0003690|GO:0006355
Psa2g0205 481 PANTHER CGI-12 PROTEIN-RELATED 26 472 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa2g0205 mTERF 2.5e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0205 K15032 - gmx:100809638 582.022