Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0182 ATGGCCAACAACGATACAAACGAGCCCTTGCTATTGAGATTGCAGGACACTGAACCTCAAAAGGGTAAAAGACGGCCAAACCAAAGAAGGCTCCTTCGTTCTCGAAGTGCTCCTCATACAGATCATGCTCCTCTGGTGACAAACGGCAATGAATCAAATCCTCTTTCTGAGCCCATGTTTGGGAATCTACATCCAAGCTTTAGAAAAGTTGCTATAATTCTTATGGTCTATTTAAGCGTAGGAACTTTAATCTTCTACCTTGTCAGGAACCAGATCAAAGGAATGAAAACAGATAGATTCCTTGATGCCCTATACTTTACGATTGTGACGATGACTACCGTTGGATACGGAGACCTTGTTCCCAATAGTGACCTTACAAAACTACTCGCGTGCGCTTTTGTTTTCTCCGGAATGGCATTGATGGGGCTAATCCTAAGCAAAGCAGCAGATTACTTGGTTGAGAAGCAAGAAGTTTTGTTAATTAAAGCCATCCACATGCACCAAAAAGTCGGTCCAAGTGAAATTTTAAAGAAGCTTGAGACCAACAAAACAAGATACAAATTTATTCTGGTCCTTTTCCTTCTTTTGATTCTCGTTATTGCGGGAACAATCTTCTTAGTCACGGTTGAAAAATTGGATGTTATTGATGCCTTTTACTGTGTTTGTTCAACAATTACAACTCTTGGTTATGGAGATAAAAGTTTCTCTACTCAAGCTGGTAGAATATTTGCGGTGTTTTGGATATTAACCGGCACTATTTGCGTAGCTCAGTTTTTCCTCTACATGGCTGAACTAAACACTGAAAGTAGACAAAGGGCACTTGTCAGATGGGTTCTTACCAGGAAAATGACAAATCACGATTTGGAAGCTGCTGATCTTGATGAGGATGGCACTGTTGGGGCTGCTGAATTCGTAATTTATAAGCTGAAGGAGATGGGGAAGATTAGTCAAGAAGATATAACACTTGTGATGAAGGAGTTTGAAGAGCTTGACATTGATCAGTCGGGTACACTGTCTGTTTCTGATATAACACTTGCTCAATCATCTTAG 1050 0.4048 MANNDTNEPLLLRLQDTEPQKGKRRPNQRRLLRSRSAPHTDHAPLVTNGNESNPLSEPMFGNLHPSFRKVAIILMVYLSVGTLIFYLVRNQIKGMKTDRFLDALYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFSGMALMGLILSKAADYLVEKQEVLLIKAIHMHQKVGPSEILKKLETNKTRYKFILVLFLLLILVIAGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTICVAQFFLYMAELNTESRQRALVRWVLTRKMTNHDLEAADLDEDGTVGAAEFVIYKLKEMGKISQEDITLVMKEFEELDIDQSGTLSVSDITLAQSS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0182 349 MobiDBLite consensus disorder prediction 1 51 - -
Psa2g0182 349 SUPERFAMILY EF-hand 278 345 IPR011992 -
Psa2g0182 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 23 342 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa2g0182 349 Pfam Ion channel 194 265 IPR013099 -
Psa2g0182 349 Pfam Ion channel 72 153 IPR013099 -
Psa2g0182 349 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa2g0182 349 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa2g0182 349 SUPERFAMILY Voltage-gated potassium channels 178 286 - -
Psa2g0182 349 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Psa2g0182 349 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Psa2g0182 349 SUPERFAMILY Voltage-gated potassium channels 67 166 - -
Psa2g0182 349 Gene3D - 169 275 - -
Psa2g0182 349 Gene3D - 64 158 - -
Psa2g0182 349 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 23 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0182 Psa-Chr2 6918099 6920566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0182 53 349 Ion Channels AT5G55630 67.677 1.34e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0182 K05389 - gmx:100800137 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0182 2 6918099 6920566 Psa2g0182 2 6918099 6920566 ECH