Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0169 ATGCACCCCTTCAAACCAACCCTCTTTACTCTCTTCTCCACCTTCATCCTCGCCGCCGCCTCCGGTAACATCCAACTAGACTTCCCTTATTTCACCACCACAAACATCACCTTCACCGGCGATTCCTCTCTCACAAACCGCATCATTTCACTAACAAAACCCACCACATTCAGCACCGGTGCAATCCTTTACAAAAACCCAGTTTCTCTCTTTGACAAACAAACAAACACCACGTCTTCATTCTCAACAACCTTCTCTTTCTCCATCACAAACCCCAATAACCCCACTTCCTTCGGTGATGGCATCTGTTTCTTCCTCTCCCCCAATAATCTCTCATCAACATCTTCCCCATCTCCTTCTTTTTCTCCTTTTGGCCTTCCTACAAACTTCGTTGCCGTTGAATTCGATACTCGGTTCGACCCCCGTTTCAATGACCCTAACGAGAATCATATCGGTTTCAATATTGATACTTTGAACTCTCTGCGAACTGTTGACCCTATTTTCAATGGAATTGATCTCAAGAGTGGCAACACTATCACTTCTTGGATTGATTACAAGACTGATCAAAATTCTCTTTCTGTTTTCTTGAGCTATTCCGGTACTACTAAGCCACTTGAACCTATTCTCTTTGTAAATGTTGATCTTTCAGAATATTTTAGAGATAATGAAGATGTTTACGTTGGTTTCTCGGCTTCTGCTGAAAAAAGTACCGAACTTCATCAAATTGAAAGTTGGAGTTTCTACACTATTGGGTTTGAACCTGCGAGACCTCGGTTGCATAGTCACAATGTTTCCGATAATTCTGTTATCGGGAATGTGATAAACGGTAACGGTCACATATCGCGTTCTTCTAATTCGAAGAAGAGATTTGGTTTTGGTTTTGGTTTCGCTGTTGCAGGTCCTGTTTTTTTCTGTGTTGTTTTTTCTTTGTTGGGGTATTATTCGTTTTTGAGATGGAAGGTGATGAAGAAAAAGTTGTTGAAGGATTTCGAACCCGGGTTTGTTGCTTGTCCTAGAGAGTTTGATTACAAAGAATTGAAATCTGCTACAAGGGAGTTTCATCCTAGTAGAATCGTTGGCCACGGTTCGTTTGGTACTGTGTATAAAGCGTTCTTCATATCTTCTGGAACCATAGCTGCAGTGAAGCGATCGAGGCATTCTCACGAAGGGAAGACCGAGTTTCTTTCTGAGTTATCCATTATTGCTGGCTTAAGGCACAAGAATTTGGTTCAGTTGTTGGGTTGGTGTGTTGAGAAAGGTGAGCTGCTTCTTGTTTATGATTTCATGCCTAATGGAAGCTTAGACAAGATGCTTTACAAAGAACCTGAAAGGGGGAAGTTGTTGAATTGGTCTAATAGGTTTAACATTGTTGTTGGTTTAGCTTCTGTTTTGGTTTATCTTCATCAAGAATGTGAGCAAAGAGTGATTCATAGAGACATCAAAACCGGGAATGTTTTGCTGGACGGGAATTTCAATGCTAGGTTGGGTGATTTCGGATTAGCGAAACTGATGGATCATGATAAGAGTCCTGTTTCAACTTTAACTGCCGGAACAATGGGATACCTGGCACCCGAATATCTTCAATATGGTAAAGCCACTGATAAAACCGACGTTTTCAGCTACGGCGTTGTTGTGCTTGAAGTTGCTTGTGGGAGAAGGCCTATTGAAAGAGAGGGTCAAAAGATGGTTAACTTGGTGGATTGGGTTTGGGGATTGTATTCGGAAGGGAAGATAATCGAGACTGTTGATAAGAGGTTGAATGGTGAGTTTGAGGTTGAGGAAATGAAGAAGCTTTTGATGTTGGGTTTGAGTTGTGCTAATCCTGATAGTGCTGAGAGACCTACTATGAGAAGAGTATTGCAGATTCTTAACAATGAAGCTGTGCCATTTGCTTTGCCAAAAGTGAAACCAACCTTAACTTTCTCATCTGATTTGCCATTGTCTATTGATGAGATTGTTTCTGATGAGGATGGTGATGGTTGTGAAGAGTTCAATACTAGCCAGTCTATGTGTGAGATTAAAATTGATTGA 2031 0.4126 MHPFKPTLFTLFSTFILAAASGNIQLDFPYFTTTNITFTGDSSLTNRIISLTKPTTFSTGAILYKNPVSLFDKQTNTTSSFSTTFSFSITNPNNPTSFGDGICFFLSPNNLSSTSSPSPSFSPFGLPTNFVAVEFDTRFDPRFNDPNENHIGFNIDTLNSLRTVDPIFNGIDLKSGNTITSWIDYKTDQNSLSVFLSYSGTTKPLEPILFVNVDLSEYFRDNEDVYVGFSASAEKSTELHQIESWSFYTIGFEPARPRLHSHNVSDNSVIGNVINGNGHISRSSNSKKRFGFGFGFAVAGPVFFCVVFSLLGYYSFLRWKVMKKKLLKDFEPGFVACPREFDYKELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGKLLNWSNRFNIVVGLASVLVYLHQECEQRVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLYSEGKIIETVDKRLNGEFEVEEMKKLLMLGLSCANPDSAERPTMRRVLQILNNEAVPFALPKVKPTLTFSSDLPLSIDEIVSDEDGDGCEEFNTSQSMCEIKID* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0169 676 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Psa2g0169 676 Pfam Legume lectin domain 25 251 IPR001220 GO:0030246
Psa2g0169 676 ProSiteProfiles Protein kinase domain profile. 353 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0169 676 SUPERFAMILY Protein kinase-like (PK-like) 336 643 IPR011009 -
Psa2g0169 676 CDD STKc_IRAK 359 625 - -
Psa2g0169 676 ProSitePatterns Legume lectins beta-chain signature. 131 137 IPR019825 -
Psa2g0169 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 248 IPR013320 -
Psa2g0169 676 SMART serkin_6 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0169 676 CDD lectin_legume_LecRK_Arcelin_ConA 24 251 IPR001220 GO:0030246
Psa2g0169 676 Gene3D Transferase(Phosphotransferase) domain 1 429 631 - -
Psa2g0169 676 Gene3D Phosphorylase Kinase; domain 1 320 428 - -
Psa2g0169 676 PANTHER - 18 643 - -
Psa2g0169 676 Pfam Protein kinase domain 354 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0169 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Psa2g0169 676 Gene3D - 22 262 - -
Psa2g0169 676 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 18 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0169 Psa-Chr2 6671559 6673946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0169 8 659 Receptor kinase-like Gene Family AT5G55830 57.353 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa2g0169 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0169 - - adu:107496163 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0169 2 6671559 6673946 Psa2g0169 2 6671559 6673946 ECH