Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0158 ATGTCGTTGTTGGCTGCCTTTGGCGGCGACACTGTCAAAATATTCGACGCTTCCGACAAGCTTTTCGACTCTTCTGTCAAACCTGGCGATCCTTGTACCTTTAGCTTCACTCCTTCTCCTGGATTTCAAGTCAATTCAGCCAAATGGAATCACTCAAATATGGTTGCTGCAAGTGCTGGTGATGATAATAGGATCTCTTTCGGGCGTAAGAATGGACACATCATGGGGACTATTCCGGTTGATAATGTTGACAACATTGAGGAGTCAATATTGGCTGTCAATTTCAGCAACAAGGCATCCAGATATATGTGTTCTAGAGGAAGTGATCAAGTTGTAAAGATATGGGATTTGCAAAGGAAGCGCGATATTAAAAAGTTTAAGGGTCATACTAATACTGTCACAGGTGTAATGTACAATTGCAAAGACGAGCATTTGGCACCAACTGCTGGCATTAGCTTCTCTCCATCCAACGATAAGATCATTGCTGATGATAGCCTTATTGTCATGTATCCAATTTGCCGGAACTTAACATCCTTGAACTGGAGCTATGCCTTGTCACGCCCAAAATTTGACAAAAGCCATGCTTTTGATGCGGCAGTATCGGCACTAGCTGTGTTTGGTGTTGCCGGCGAGTTAGGAATGAAGATGGCTAAAGGTCCTGCATCTTCAATTGATCAAAAGATTAAGGAACATCTAAGGCAATCTGCACCTACCATGGCTGCGTTTACGAAGGCGAGGGTTGCAGTTGCTAAGATTTTTCGGATAATTGATCACAAGCTTGGAATTGACAGAAACAGTGAGTCAGGATTGGAATTGGAGACTGTTACTGGACTTGTGGAGCTGAAAAATGTCGACTTTTCTTATCCCTCTAGGCCCGAGGTTAAAATCCTCAATGACTTCTCCTTGAATGTCCCTGCCGTGAAAAACCATAGCTTTAGTCGATCACCGGACAAGTTGGTTAAGCTCCCACCTTCATCGAGGTCATCAAGGTCGTTGAAATTTGACACTCCAATGAAAAACGAAAATGATGCTAGCAGGTTATCAAGATCCTTGAAATTTGACACTCCAATGAAAAATGTAAATGTTGCTAGCAGTTTGTCGACGGATAATGACATTTTTGATATCCTACCACAAGCTAAGAAACGCAAGTATTTTATGAAGAATTTGGACAAGACATTTGATTCCAAGGCTTTGCATGACACTTTTTCTACTGTTGGACACATCCTGTTTTGCGAAATGGCTACCGTTGGTTCTGGCCAGTCTAAAGTTATGCAGAGGAAGAATGGGACAGTTGTCTGTTACGGTGCCATTGGAGTTGGAAAAACATACACAATGCTTGGTACAGTAGAAAACCCAGGAGTGATGGTGTTGGCAATTAAGGTTCTCTTCAGTAAAATCAGGACCAGAAGCTATGATGGAAACCATGTAGTTCATCTGTCCTATCTCGAGGTTTATAACGAAACTGTAAGAGATTTGATTTCACCTGGAAGGCCTCTTGTTTTGAGAGCAGCAGGCCTTACGCAATACAGAGTTTACTCCGCCGATGAAGTGATGGCATTGCTTCAGCAGGGAAATCGTAACAGAACTACGGAACCAAGCTCAATGATCTCTAAGAAAAATATGGATATCAATCCTATTGATCAAGATGTCAACAAATTCAAAGTATCAGATGATGTCGGGGATAGACAGTTTGATTCTAATCATGGACATCGGTCATACGGATACAACTACACAGTTGAAGATGTTTTGGTTCTGTTTTTAAGGACCATGGTGGTAGTGACATTGACACTAGTAGCGGCATTCCAATCACAGTTCATGAGGCAATAG 1827 0.4209 MSLLAAFGGDTVKIFDASDKLFDSSVKPGDPCTFSFTPSPGFQVNSAKWNHSNMVAASAGDDNRISFGRKNGHIMGTIPVDNVDNIEESILAVNFSNKASRYMCSRGSDQVVKIWDLQRKRDIKKFKGHTNTVTGVMYNCKDEHLAPTAGISFSPSNDKIIADDSLIVMYPICRNLTSLNWSYALSRPKFDKSHAFDAAVSALAVFGVAGELGMKMAKGPASSIDQKIKEHLRQSAPTMAAFTKARVAVAKIFRIIDHKLGIDRNSESGLELETVTGLVELKNVDFSYPSRPEVKILNDFSLNVPAVKNHSFSRSPDKLVKLPPSSRSSRSLKFDTPMKNENDASRLSRSLKFDTPMKNVNVASSLSTDNDIFDILPQAKKRKYFMKNLDKTFDSKALHDTFSTVGHILFCEMATVGSGQSKVMQRKNGTVVCYGAIGVGKTYTMLGTVENPGVMVLAIKVLFSKIRTRSYDGNHVVHLSYLEVYNETVRDLISPGRPLVLRAAGLTQYRVYSADEVMALLQQGNRNRTTEPSSMISKKNMDINPIDQDVNKFKVSDDVGDRQFDSNHGHRSYGYNYTVEDVLVLFLRTMVVVTLTLVAAFQSQFMRQ* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0158 608 Gene3D Kinesin motor domain 336 541 IPR036961 -
Psa2g0158 608 Gene3D ABC transporter type 1, transmembrane domain 232 268 IPR036640 GO:0005524|GO:0016021
Psa2g0158 608 ProSiteProfiles Trp-Asp (WD) repeats profile. 83 125 IPR001680 GO:0005515
Psa2g0158 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 535 IPR027417 -
Psa2g0158 608 Gene3D - 2 179 IPR015943 GO:0005515
Psa2g0158 608 PANTHER PROTEIN NEDD1 1 146 IPR044621 GO:0010968|GO:0140496
Psa2g0158 608 ProSiteProfiles Kinesin motor domain profile. 359 535 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0158 608 PANTHER PROTEIN NEDD1 1 146 - -
Psa2g0158 608 MobiDBLite consensus disorder prediction 315 346 - -
Psa2g0158 608 Gene3D - 269 306 IPR027417 -
Psa2g0158 608 SUPERFAMILY WD40 repeat-like 3 146 IPR036322 GO:0005515
Psa2g0158 608 SMART kinesin_4 246 604 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0158 608 Pfam Kinesin motor domain 421 535 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0158 Psa-Chr2 6227328 6231348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0158 232 309 Calmodulin-binding Proteins AT2G36910 78.205 2.51e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0158 K16547 - gmx:100785510 214.542