Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0147 ATGTCTGCAAACTCAAAGAATATGTCACTTTTTCTTCTCTTATTAAACTTTCTTTTCTTTTCATGTTGCAACTCTCTTCTTGATGAGCAAGTTCAAGCTCTTCTAGCATGGAAGGAGAGTTTAAACACGAATTCAGACGCATTACCGTCGTGGAATCTCTCAAACGGAACACCGTGCAACTGGTTCGGTGTGAAGTGCAATTTGCAAGATGAGGTAGAGGAGATAAACTTGAAGTCGTTGGACTTGCAAGGCTCGTCATTGCCTTCGAATTTTCAACCTCTCAAGTCATTGAAAGTTCTTGTCCTCTCGTCGATGAACATCGCGGGAAGGATTCCGAAAGAATTTGGAGACTATCAAGACCTTGTTTTCGTTGATCTTAGTGAAAATTCTCTCTTTGGTGAAATCCCGGAAGAAATCTGCAGGCTAAGCAAGCTTCAAAGCTTAGCTCTTCATACAAACAATCTCGAAGAAAATATTCCATTCAACGTAGGAAATTTATCGAGTCTTGTGAACTTGACACTCTTCGATAATAAACTCAGTGGCGAAATTCCAAAGAGTATTGGCTTATTACGTAAGCTTCAAGTATTCAGAGCTGGAGGGAACAAAAACCTCAATGGTGAGCTGCCATCGGAGATCGGAAACTGCACCGACTTGGTCATGTTAGGCCTCGCGGAAACCAGCATTTCCGGTAGTATTCCTTCGTCGATAGGAATGCTGAAAAAATTACAGACCATAGCCATTTACACAAGTAAGTTATCAGGCTCTATTCCAGAAGAGATAGGAAATTGCAGTGAGTTGCAGAATCTGTATTTGTACGAAAACTCAATTTCCGGTTCAATTCCACGTCAAATCGGAGAGCTCGGAAAGCTTCAGAGTCTACTTTTATGGCAAAACAATTTGGTAGGGACAATTCCGGAAGAGCTCGGAAGATGCAAAGATCTCAGTGTTATAGATTTGTCAGAAAATCTTCTCACAGGTAGCATTCCGATCAGTTTCGGAGAGCTATCGAATCTTCAAGGACTTCAGCTGAGCGTTAATCGGTTATCGGGTATTATACCACCCGAGATTTCAAACTGTGCGTCTCTGACTCAGTTTGAAGTTGACAACAATGCTATTTCTGGTGAGATTCCTTCTGTTATTGGAAAATTGAGAAGCTTGACACTTTTCTTTGCATGGAAGAATAAGTTAACAGGAAAAATTCCGAATAGCCTTTCGGAGTGCGAAAATCTTCAAGCACTTGATCTGTCATATAACAACTTAACTGGTACAATACCAAAACAGCTTTTTGTGTTGAAAAATCTCACTCAACTTATGCTTCTTTCCAATGATTTGGAAGGATTCATACCACCTGATATAGGTAACTGCACAAGTCTTCACAGGTTGAGGCTAAATCGGAATAGACTTGTCGGTATTATTCCATCTGAGATTGCGAATTTGAAGAGTTTGAATTTTTTGGACTTGAACAACAATGATCTTGTAGGGGAGATTCCTTCAACAATATCAAGATGTCGGAATCTTGAGTTTATCGATCTCTCACACAACAAGCTCTCCGGGAATTTAGATGCTCTTTCTAACCTTCTGAATCTTGGTTCTTTAAATGTTTCCTTCAACGAATTCTCGGGAGAATTGCCTAACACGGCGTTCTTCAGAAAACTCCCTCTCAGTGATTTCACTGGAAATAACATATCAGAAGCCAAATATGATACCAGATTAGCTATGAAGATTATATTTTTCATTTTGTTAAGCACAAGTGCAGTACTTACACTTTTCCTAATCCACGTCGCGGTTCGTGCTTGTATTGCTTACAAAGTAAATAACAGTTGGAAGATGATTTTGTACGACAACCTTTATTTCTCTGCCGACGACATTGTCAAGAATTTAAAACCATCCAATGTGATTGACACCGGAAGCTCAGGAGTTTCGTACAAGGTGAAAACTCCAGAAGGCCAAATATTAGCGGTTAAAAAGATGTTGCCATCATTAGATTCTGAAGCAGTTATGTCTAAAATCGAAATGCTATGTTCAATCAAACACAAGAATCTTGCCAAACGTCTCGGTTGGGGGTCGAATAATAAGAATATGATGCTGCAGTTTTATGAATACCTCCCTAGTCTGAGCTCAGTGCTTCATGGTTCAGAAAAGGGAAAGTTGGAATGGGATACCAGATATGAAATCATCTTAGGTTTGGCTCAAGCACTCACATTTTTGCATCATGATTGTGTGCCTTCTGTGTTGCATGCAGATGTCAAAGCAACAAATGTGTTATTAGGTTCTGGTTATCATCCTTACCTTACCCGCTTTGGCCTCGCAAACATCGCCAGTGAAAAAGTCGAAGATGATAAATCCAATCCAGAGCTCGACTCAATACAGAAGATCAACGAAAAAACCGACGTGTACAGTTTCGGCGTGGTGATACTCGAGGTACTGACAGGAAGGCATCCATTAGATCCAACTCTACCAGAAGGCATAGACTTGGTTCAATGGGTTAAGAATCACTTGGCTAGCAAAAAAGACCCATTTGAAATTCTTGACTCGAAGCTGAGAGGAAGGACTGAACCTACTACTATGCATGAAATACTTCAAACTCTAGCTGTGTCGATTTTATGTGTCAACGCAAAAGCTTATGAAAGGCCAACAATGAAGGATACTCTTGCGATGCTCAACCAATTTCGATATTTTGTTTAA 2685 0.4011 MSANSKNMSLFLLLLNFLFFSCCNSLLDEQVQALLAWKESLNTNSDALPSWNLSNGTPCNWFGVKCNLQDEVEEINLKSLDLQGSSLPSNFQPLKSLKVLVLSSMNIAGRIPKEFGDYQDLVFVDLSENSLFGEIPEEICRLSKLQSLALHTNNLEENIPFNVGNLSSLVNLTLFDNKLSGEIPKSIGLLRKLQVFRAGGNKNLNGELPSEIGNCTDLVMLGLAETSISGSIPSSIGMLKKLQTIAIYTSKLSGSIPEEIGNCSELQNLYLYENSISGSIPRQIGELGKLQSLLLWQNNLVGTIPEELGRCKDLSVIDLSENLLTGSIPISFGELSNLQGLQLSVNRLSGIIPPEISNCASLTQFEVDNNAISGEIPSVIGKLRSLTLFFAWKNKLTGKIPNSLSECENLQALDLSYNNLTGTIPKQLFVLKNLTQLMLLSNDLEGFIPPDIGNCTSLHRLRLNRNRLVGIIPSEIANLKSLNFLDLNNNDLVGEIPSTISRCRNLEFIDLSHNKLSGNLDALSNLLNLGSLNVSFNEFSGELPNTAFFRKLPLSDFTGNNISEAKYDTRLAMKIIFFILLSTSAVLTLFLIHVAVRACIAYKVNNSWKMILYDNLYFSADDIVKNLKPSNVIDTGSSGVSYKVKTPEGQILAVKKMLPSLDSEAVMSKIEMLCSIKHKNLAKRLGWGSNNKNMMLQFYEYLPSLSSVLHGSEKGKLEWDTRYEIILGLAQALTFLHHDCVPSVLHADVKATNVLLGSGYHPYLTRFGLANIASEKVEDDKSNPELDSIQKINEKTDVYSFGVVILEVLTGRHPLDPTLPEGIDLVQWVKNHLASKKDPFEILDSKLRGRTEPTTMHEILQTLAVSILCVNAKAYERPTMKDTLAMLNQFRYFV* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0147 894 Gene3D Ribonuclease Inhibitor 280 379 IPR032675 -
Psa2g0147 894 SUPERFAMILY L domain-like 311 563 - -
Psa2g0147 894 Pfam Protein kinase domain 632 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0147 894 PRINTS Leucine-rich repeat signature 410 423 - -
Psa2g0147 894 PRINTS Leucine-rich repeat signature 479 492 - -
Psa2g0147 894 SMART serkin_6 627 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0147 894 Gene3D Phosphorylase Kinase; domain 1 600 701 - -
Psa2g0147 894 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Psa2g0147 894 ProSiteProfiles Leucine-rich repeat profile. 505 527 IPR001611 GO:0005515
Psa2g0147 894 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 511 - -
Psa2g0147 894 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 509 893 - -
Psa2g0147 894 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Psa2g0147 894 SUPERFAMILY Protein kinase-like (PK-like) 615 889 IPR011009 -
Psa2g0147 894 Gene3D Ribonuclease Inhibitor 383 571 IPR032675 -
Psa2g0147 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Psa2g0147 894 SMART LRR_typ_2 526 550 IPR003591 -
Psa2g0147 894 SMART LRR_typ_2 335 359 IPR003591 -
Psa2g0147 894 SMART LRR_typ_2 287 311 IPR003591 -
Psa2g0147 894 SMART LRR_typ_2 479 503 IPR003591 -
Psa2g0147 894 SMART LRR_typ_2 142 166 IPR003591 -
Psa2g0147 894 SMART LRR_typ_2 407 431 IPR003591 -
Psa2g0147 894 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 509 893 - -
Psa2g0147 894 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 511 - -
Psa2g0147 894 Gene3D Ribonuclease Inhibitor 185 279 IPR032675 -
Psa2g0147 894 Gene3D Transferase(Phosphotransferase) domain 1 703 892 - -
Psa2g0147 894 Pfam Leucine rich repeat 314 372 IPR001611 GO:0005515
Psa2g0147 894 SUPERFAMILY L domain-like 60 322 - -
Psa2g0147 894 ProSiteProfiles Protein kinase domain profile. 627 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0147 894 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0147 Psa-Chr2 5266681 5270297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0147 27 893 Receptor kinase-like Gene Family AT4G26540 45.064 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa2g0147 Pkinase 2.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0147 - - cam:101492613 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0147 2 5266681 5270297 Psa2g0147 2 5266681 5270297 ECH