Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0144 ATGAAGTTCAATCCAGGGGTTTCTAGCAGCCGTCGCAAGAGCCGTAAAGCTCATTTCACAACACCGTCAAGCGTCCGATGCGTGTTAATGAGCGCTCCACTCTCCGGCGACCTTCGATCCAAATACAACGTTCGCGCCTTACCAGTTCGCAAGGACGACGAGGTTCAGGTGGTTTATCGCAAGAAGTGGGTGATTCACATCGAGCGCATAACACGTGAGAAAGTTAACGGTTCAACGGTTAACGTTGGTTTGGACCCTTCCAAGGTGGTTATCACGAAGCTCCGTTTGGATAAGGATTGGAAGTCGTTGATTGATAGGAAGGCGAAGGGTCGTGCTGCTGCTGATAAGGAAAAGGGTACTAAGTTTTCTCCTGAAGATATCATGCAAACCATTGATTAG 399 0.4862 MKFNPGVSSSRRKSRKAHFTTPSSVRCVLMSAPLSGDLRSKYNVRALPVRKDDEVQVVYRKKWVIHIERITREKVNGSTVNVGLDPSKVVITKLRLDKDWKSLIDRKAKGRAAADKEKGTKFSPEDIMQTID* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0144 132 MobiDBLite consensus disorder prediction 107 132 - -
Psa2g0144 132 SUPERFAMILY Translation proteins SH3-like domain 8 111 IPR008991 -
Psa2g0144 132 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 132 IPR005756 GO:0003735|GO:0006412|GO:0015934
Psa2g0144 132 TIGRFAM rplX_A_E: ribosomal protein uL24 8 108 IPR005756 GO:0003735|GO:0006412|GO:0015934
Psa2g0144 132 PANTHER 60S RIBOSOMAL PROTEIN L26-1 1 132 - -
Psa2g0144 132 CDD KOW_RPL26 52 91 IPR041988 GO:0003723
Psa2g0144 132 Gene3D - 1 58 IPR014722 -
Psa2g0144 132 Gene3D - 59 111 IPR014722 -
Psa2g0144 132 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 107 IPR005756 GO:0003735|GO:0006412|GO:0015934
Psa2g0144 132 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0144 Psa-Chr2 5250578 5251018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0144 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G67510 72.603 1.01e-72 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0144 K02898 - sind:105177817 216.083