Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0119 ATGTCTTCTTCTTCTTCTTCATCTTCTTCTTCCTCTTCCTCTTCTTCTTCTTCCTCATCATCACAACCAAATGTTACTTCTCAAATCCAACCTTCTCCTCCTCCTGCCAATGATATTGATGCTCCTTCTTCCTCTCGACAACGCTCCATGAATAATGAAGTCTGGCTTGAACCTGTTGTCGAAGCATTAGCCACTCAAGTTGCCATTGATGCTTCTCATTTTCATGGTCGTCTTTCTGCTGCTTCTGCTCTCGCCATTATTTTTCAGGTATGTTCAACATGGAGAGAAGTGTCACGCTCGGATCTACTGTGGCAGAGGCTCACGAGACGCATCTGGCGCAGAACCTATCGATTGAGAGACACGTGGCAACTAGAATACATCTACTGGCATCGAACGGCTAGGAACTTCACAACAGGTAGACACGCATTAGTTGTCCCACAATACGATCCAGGAGATCCTCACCAAACCCTCATCTGCCGTTGTCTCACTCTCTCCGACACTCACCTCGCCTGCGGCTTTGTCGACGGCACGGTTCGTCTCTTCGACCTCATCACCGGCGCACACATCGCAACATTCTGGTCGAATCATGGTCATCTCTTTGGCCCGTTTTCCCAATCCGTGTCCGGGATAGTAATTGCGAATTCCAATCTCGCAACAGTTGCCTTTGCGAGATTAGATGGAGATGTGTACGTCGCGATTATCAATGGGTCCGAGATTATTCCCGGACCCATTGCAGCACGACGTGCAATCTCCGGTGATGTTGTTAATAACGGAGTATTGGTGGAATTCGCGGGGTGTAGTCGGTGGTGGATTGGTTTGTTTGCCGGTCATGCTGGCGGGGCTTTTCAAATATGGGACGCGCTAACAGAGCAGCGCGTGTTTATTGGCGGTTCATTAACCGATCCAGAAACGGTTCAAGGATGGCATATGTTAACCGAGTTGGTCGAACCGGTGGGTCGAGTAAGAGTAACAGAAAGAGAGTTCGTTGTAGCATGCACAAGTTCGAGATTGGTTTGTTTCAGCTTAAGAAACCCAGAGGTTTTATTACGTGACGTGGGGTCCACCACAGGTTTTGTTGTAGGTTCATTGGATGTTTGTCACGAGGTTTTCGTTGTAGTGGAAAGAAACGGCGTTGGAACGGTTAGGCGCGTGGGGAGTTTCGAGCGCGTGAGTAGGTTTAGATTGAGAGGTTCGTGGTTGAGGGGTTTGTTGGGGTGCATGAATTTGGGATATGTTATAACGTATTCTGGCGGGTCTGGTTTGTTGAGAGTTTGGGATATTCACGAGCCTGCGGCGCGATTGTGTATCACGCTCGGTGTTAGAGAAGATGGAGAAGGACAAGTTCATGGGAATAGTATGGTTGCGAATCAAACTCACGTGGCTATCTCATCTAATGACTCTTCAATACATTTATTGGATTTTAGTGTACAGTAA 1434 0.4784 MSSSSSSSSSSSSSSSSSSSSQPNVTSQIQPSPPPANDIDAPSSSRQRSMNNEVWLEPVVEALATQVAIDASHFHGRLSAASALAIIFQVCSTWREVSRSDLLWQRLTRRIWRRTYRLRDTWQLEYIYWHRTARNFTTGRHALVVPQYDPGDPHQTLICRCLTLSDTHLACGFVDGTVRLFDLITGAHIATFWSNHGHLFGPFSQSVSGIVIANSNLATVAFARLDGDVYVAIINGSEIIPGPIAARRAISGDVVNNGVLVEFAGCSRWWIGLFAGHAGGAFQIWDALTEQRVFIGGSLTDPETVQGWHMLTELVEPVGRVRVTEREFVVACTSSRLVCFSLRNPEVLLRDVGSTTGFVVGSLDVCHEVFVVVERNGVGTVRRVGSFERVSRFRLRGSWLRGLLGCMNLGYVITYSGGSGLLRVWDIHEPAARLCITLGVREDGEGQVHGNSMVANQTHVAISSNDSSIHLLDFSVQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0119 477 Gene3D - 129 477 IPR015943 GO:0005515
Psa2g0119 477 SUPERFAMILY WD40 repeat-like 160 474 IPR036322 GO:0005515
Psa2g0119 477 MobiDBLite consensus disorder prediction 1 47 - -
Psa2g0119 477 SUPERFAMILY F-box domain 77 135 IPR036047 GO:0005515
Psa2g0119 477 PANTHER WD40 REPEAT PROTEIN 12, 37 11 476 - -
Psa2g0119 477 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 11 476 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Psa2g0119 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0119 - - gmx:100807240 598.586