Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0117 ATGTCTGAAACAAACATTTCTTCCGATGGTGGCAATATAGAACTTGGTGCTAGCTTACTCATTAGTGGTAGCAAATACAACAAGATATGGCGCAAAAGTTTATACGTCGGATTCATGATCTCCTTGAAGAGGCCTACAACTTTTAGTAACAACTATGAAGAATCTACATCATCATTACTATACGATTCATTGCATCATAGTCCTCCTGCTAGAACCTCGTCAGCCAAATCTTTTGTTTCAATTGATGTAGACTCTCATGTCCAAGAGGAGGAGCGAGAAGAAGACGACGTGGTAGAAGAGCATGTTAAGACTGATATTGCTAGAATTGTGAAGGAGAAGGACTTGAAATCTCTTGTTGAACTTGGTGGAGTTGGTAGAGTTTGCCATGTTCTTCATGGTCAATCTCAACGCTCATCAGAGGAGATGATTGAGAACCTTGGAGCAAGCTTCTCTGGTTTTCTTTGGAAAAGCTGCAAGCAAAATCTTTATACGATTTCAATGTTGTTGATTTCAGCCTTATTATCCTTTGCCACGGAGTTTAAAAAGGAGGGACCTAGATATGGTTGGCATGATGGTGTTGCTATGGTTTTTGCTGTTTTACTTCTGATTGCATTCTCTTCGATAACTAGCTTTTGGCGCGAAAGAAAAACAATCAAGTTGGCAAAGAAAAAAGGCGATGCGATGAAATTCAATGTTAAAAGACACGAAGTTGATCTTACTCTTTCCATATATGATCTTGTGGTGGGTGACATGGTGTTTTTGAGTCCTCGTGATGAGGTTCCTGCTGATGGTTTGCTTTTGAGTAGTGACAATCTTATGTTGGTTGAGGGAATGAAAAATGAAAAAATTGATTGTGAAGAGAACCCTTTTCTTATAGCCAGTTCGAAGGTGATTGAAGGTCGTGGATGGATGCTTGTGACATCAGTTCGAAACAAATCAAACTCGGCTGAGATCAAGAGATGCCTTTTGGAAAATCTAATTGAGAAGCCAATTTCATACCTTGACAAAGTTTCTCTTTTTATCTTTACACTTGTTTCACTTGTGTTGTTCATTCGTCTAATTTGTAAAAAAGACGGAGATGATGGCGGACTTCCAGATATTAAAGGGAGTAACGTTTCAGTTAGCATGTTAACAAAACTCCTTGAAGATATTCTTTCAAGCCCACAAGGAAAGATTGAAATTTTAGCACGTCTTTTTAGTATTATAGTATTATGTGTGCAACATGGAGTGCCATTGATGATTACTTTATCTTTCCAGTACCAGAATGATGAAGTAGTGCTTAATCAAGAGGTTGTTATGAATGATTTGTCAGCTTGTACAACAATGGGGTTGGTAAATGTCATCTGCATCGATGTATCTGGCGGTGGACTAATATTTAAGCCAATGGAGGTCGGTGAAATATGGATAGGGGAAGAGGAGACAGACATGAACAATATTCGGGAATCGGGAACATGTCAAGATGTACTGGAGAAGCTTAAACAAGGAGTTTGTTTATCAGTTCTCGCACCAGGACTATCTCCTTCTCATGTGTCTAACTCACTTGCTTCTTGGGCAACAACAAAATTGGAAATGGACATTATATCTTTTAGAGAAAATTTTCATATTCTTGAGCATGGAAAACTGGATTCTAACCAAGAGGGAAATGGAGTTTTGGTGAAAAAAGTAAGTGTCAATGAACAATTTATGCACTTGCACTGGAGTGGGGATGCATCCATAATGTTGGAAATGTGTTCACAATACTATGATAGTGAAGGAACGTGTCATTCCATTGAAAATCAGAAAAACAAATTTGGGCAAGTGATTCAAGAAATGGTGTATAGTGGCCTTAAACCAATTGCATTTGCTTATAGACAAACACAGGTGCAAGAACTCAAGCAAGACGAGATGACCTTATTAGCACTAATGGGTCTCAAATACAAATGTGAAGAATCGACAAAAATAGCTTTGAAAGCCCTTGAAAATAATGGAATACATATCAAATTGGTTTCAGAGGATGATGATATCATGATACTGAATGACATGGCTTGTGAACTTGGAATGGAAGTGTCGATAGACGGTGGTCGCCTTGAAGGAGAGCAAATTCGTGATTTGGATGACAAAACCAAATTGGTTAAAGTGGATAAAGCCATTACAATGGGAAGTTTCAGTCCTAAAGACAAGCTTCTCATGGTAAAGTGTTTACAAGAAAGAGGTGATGTGGTTGCATTTATTGAACAAAGATTGTTGACTAATCGTATTTCGGACGTTCTAAAGCAAGTTGACGTAGGGATAATCCATAACTCTTCAAGCAGAATAATTGACAGAAAAGAGAGTTCTGATATATCTATCACATGTTTCAGTGCATTGGAAACAATAGTGAAGGAAATTCTTCCCTAA 2376 0.3805 MSETNISSDGGNIELGASLLISGSKYNKIWRKSLYVGFMISLKRPTTFSNNYEESTSSLLYDSLHHSPPARTSSAKSFVSIDVDSHVQEEEREEDDVVEEHVKTDIARIVKEKDLKSLVELGGVGRVCHVLHGQSQRSSEEMIENLGASFSGFLWKSCKQNLYTISMLLISALLSFATEFKKEGPRYGWHDGVAMVFAVLLLIAFSSITSFWRERKTIKLAKKKGDAMKFNVKRHEVDLTLSIYDLVVGDMVFLSPRDEVPADGLLLSSDNLMLVEGMKNEKIDCEENPFLIASSKVIEGRGWMLVTSVRNKSNSAEIKRCLLENLIEKPISYLDKVSLFIFTLVSLVLFIRLICKKDGDDGGLPDIKGSNVSVSMLTKLLEDILSSPQGKIEILARLFSIIVLCVQHGVPLMITLSFQYQNDEVVLNQEVVMNDLSACTTMGLVNVICIDVSGGGLIFKPMEVGEIWIGEEETDMNNIRESGTCQDVLEKLKQGVCLSVLAPGLSPSHVSNSLASWATTKLEMDIISFRENFHILEHGKLDSNQEGNGVLVKKVSVNEQFMHLHWSGDASIMLEMCSQYYDSEGTCHSIENQKNKFGQVIQEMVYSGLKPIAFAYRQTQVQELKQDEMTLLALMGLKYKCEESTKIALKALENNGIHIKLVSEDDDIMILNDMACELGMEVSIDGGRLEGEQIRDLDDKTKLVKVDKAITMGSFSPKDKLLMVKCLQERGDVVAFIEQRLLTNRISDVLKQVDVGIIHNSSSRIIDRKESSDISITCFSALETIVKEILP* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0117 791 Pfam E1-E2 ATPase 232 353 - -
Psa2g0117 791 SUPERFAMILY Calcium ATPase, transduction domain A 230 320 IPR008250 -
Psa2g0117 791 PANTHER CATION-TRANSPORTING ATPASE PLANT 91 787 - -
Psa2g0117 791 Gene3D - 229 306 - -
Psa2g0117 791 SUPERFAMILY HAD-like 629 737 IPR036412 -
Psa2g0117 791 Gene3D - 634 786 IPR023214 -
Psa2g0117 791 Gene3D - 307 463 - -
Psa2g0117 791 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 520 637 IPR023299 GO:0000166
Psa2g0117 791 Gene3D - 464 633 IPR023299 GO:0000166
Psa2g0117 791 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 443 IPR023298 -
Psa2g0117 791 PANTHER CATION TRANSPORTING ATPASE 91 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0117 Psa-Chr2 4345359 4347947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0117 106 787 Primary Pumps ATPases AT3G63380 31.293 2.05e-66 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0117 K01537 - gmx:102661547 687.567