Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0112 ATGGAAGAAAATAAAGAGGAAGCGCTTAAGGCGATAGAGATAGCTGAGAAGAGATTTTCTCAGAGAGACTTTGAAGGTGCGAAAAACTATGCTTTAAAGGCTAAAACACTTTGTCCTGAGTTGGATGGTGTATCTCAAATGGTGGCGACGTTTGAAGTTTATTTTGCTTCTGAGTTCAGACATAATGGAAAGCTTGATTATTATTCGGTTCTTGGACTGAAACCAACTGCAGATGAAGCGGCTGTCAAGAGGAAGTACAAGAAGTTGGCAGTGTTGCTTCATCCAGATAAGAACAAATGTGTTGGAGCTGATGGGGCGTTTAAGCTTGTTTCCGAGGCGTGGACTTGTCTCGACAATGCTATGCGTAGTTCTTATGATCTCAAGAGAAATTTTTCTTCTGTTGTTCAGGCTACAGGTTATAACTGTTCCAATATGCCGCCGACGTCTTGTAGTAAACTCGACACCTTTTGGACAATCTGTACCGCTTGTAAGGTTCAGTATGAGTATATGCGCAAGTATGTGAATAAAAAACTCTCTTGTAAGAACTGCCGCGGTGTTTTTATTGCGGTTGAAACTGGTGCAGCCCCAGCAAATGGTTCATTTCCGTATCAACCTGTGCCATATGTGCCAGGAAATGGGTATGGAAATCAATCAATTGACGGAGTTACATATGCTCCGTCTAATGCCCCCTATTTTAATGGCAATGGAGTCCAAGGATACCATTCTGGACACAGTTACGAGTATGTTTCAAATGTTTCGTTTCAGATGGGCTCTGCTGGTTATATCCATCAAAACGGGTCACCTACTGCTCTACCTGCTGGTTCTGTTTATCAGGTCAATGGAAATGCAAAGAGGGGAAGACCAAAGGTCAAACCAGAAGTAGCTAATGGAAGGCATCCTATGGCAGAGACCATGGTCAACATAAACTCACATGTATCGTTCTCGTGTAATGAACTGCAAGAAGTTAAGCTTGGTAGACCTGACAAGAAACGTAAACTTACGGTGGGAGCCAGTTTCAAAAACGGATTTGATGAAAAAGGGTCAAAATGTGCTTCAGAAGCAGTAGTGTCAAATGGAAATGATTGCGTTGGAAATAGCAGACTTGGCCAGAAGCTTTCCAATAGGACAGAGGAATGTTCCAGCCAAAGCAAATATGGGCCTTATATGATGAGGAAGACGGAATGCCGCGATTGTATTGTCTGTCCGCGAGGTTTTACCAAATCTTGCGGAAATTTCAGGGCTTGGACTTCAGATATTGTAGACCAAGTCAACATATTTTCTCATGTTCTAAGCCGCGAGAAGGCAGGCCGAGGTGGTTGTGTTCGCATATATCCAAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCCGATTGGAACCACTCTACACCGGACAAAGTAAGGCATGAATATGACATGGTGGAGGTGCTGTATGATTACTCCGAGGATCTCGGTGTCTGTGTTACTCCCCTTATCAAGTTAGCTGGATTCAAAACAGTATACAAAAGGAATCCTGACCAAAGTGCCGAAAGATGGATACCGAGAAGAGAAATGGTACGTTTTTCACATCAAGTTCCTTCTTGGTTGCTGAAAGGGGAGGAAAGCAAATTGCCGGATCGGTGTTTTGATCTTGATCCAGCTGCAACTCCGGACGAGCTTCTTCATACTGCTGCTACAGAAGCAAAAGCTTTGTAG 1701 0.4339 MEENKEEALKAIEIAEKRFSQRDFEGAKNYALKAKTLCPELDGVSQMVATFEVYFASEFRHNGKLDYYSVLGLKPTADEAAVKRKYKKLAVLLHPDKNKCVGADGAFKLVSEAWTCLDNAMRSSYDLKRNFSSVVQATGYNCSNMPPTSCSKLDTFWTICTACKVQYEYMRKYVNKKLSCKNCRGVFIAVETGAAPANGSFPYQPVPYVPGNGYGNQSIDGVTYAPSNAPYFNGNGVQGYHSGHSYEYVSNVSFQMGSAGYIHQNGSPTALPAGSVYQVNGNAKRGRPKVKPEVANGRHPMAETMVNINSHVSFSCNELQEVKLGRPDKKRKLTVGASFKNGFDEKGSKCASEAVVSNGNDCVGNSRLGQKLSNRTEECSSQSKYGPYMMRKTECRDCIVCPRGFTKSCGNFRAWTSDIVDQVNIFSHVLSREKAGRGGCVRIYPRSGDIWAVYRNWSPDWNHSTPDKVRHEYDMVEVLYDYSEDLGVCVTPLIKLAGFKTVYKRNPDQSAERWIPRREMVRFSHQVPSWLLKGEESKLPDRCFDLDPAATPDELLHTAATEAKAL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0112 566 PANTHER BNAC03G44070D PROTEIN 1 380 - -
Psa2g0112 566 PANTHER BNAC03G44070D PROTEIN 400 559 - -
Psa2g0112 566 CDD DnaJ 66 119 IPR001623 -
Psa2g0112 566 PRINTS DnaJ domain signature 68 86 IPR001623 -
Psa2g0112 566 PRINTS DnaJ domain signature 86 101 IPR001623 -
Psa2g0112 566 PRINTS DnaJ domain signature 102 122 IPR001623 -
Psa2g0112 566 SUPERFAMILY Chaperone J-domain 59 129 IPR036869 -
Psa2g0112 566 ProSiteProfiles dnaJ domain profile. 66 129 IPR001623 -
Psa2g0112 566 Pfam DnaJ domain 66 126 IPR001623 -
Psa2g0112 566 SMART dnaj_3 65 122 IPR001623 -
Psa2g0112 566 Pfam Domain of unknown function (DUF3444) 396 536 IPR024593 -
Psa2g0112 566 Gene3D DnaJ domain 56 142 IPR036869 -
Psa2g0112 566 PANTHER BNAC03G44070D PROTEIN 1 380 - -
Psa2g0112 566 PANTHER BNAC03G44070D PROTEIN 400 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0112 Psa-Chr2 4016575 4018657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0112 4 292 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.677 1.77e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0112 - - gmx:100792639 538.88