Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0111 ATGAAGATGGAGAAGGACTCAACCACCCTTTTCATCAACACACTCCGTTTCTTCTTCTTCTTACAGTTTCAGAGCTTTCTTTCACTCTCAGATTCTTCACTATTCCCCATTGAAGCACTTCCCACAAAATCAGGTTACCTACCAATAAGTCCCACTTCCACTTCCTCCATTTTCTACACATTCTATGAAGCACAAAACTCCACTTCACCTCTCTCCCAAACCCCTCTTCTCATATGGCTTCAAGGTGGCCCTGGTTGCTCCTCCATGATCGGCAACTTCTATGAACTTGGTCCCTATCTTGTCACCAACTCACTCACCCTTCAACCAAACCCTTCTTCTTGGAACAGAATCTTTGGCCTTCTTTTTCTTGATAATCCCATTGGAACTGGCTTCAGTGTAGCCTCAACTCTAGAAGAGATTCCAACCAATCAAAACGCGGTAGCAGAACATCTTTTTGCTGCTATAACAAGGTTTGTGCAGCTTGATCATGTTTTCAAACATCGTCCTATTTATATCACTGGTGAAAGCTATGCTGGAAAGTATATTCCTGCTATTGCGTGCTACATATTAGAGAAAAACAATGTTTTGAAAGACAATGAGAGAGTGAATTTAGCTGGTGTTGCAATTGGTAATGGACTAACAGATCCTGTGACCCAAATGGTTACTCATGCTGATAATGCTTATTATGTTGGATTAATCAATGAGGGACAAAAACATGAGTTGGAAAAATTACAACTTGAAGCTGTTGAGTTGGTAGAGAGAAGGAATTGGAGTGAGGCGACTCGGGCGAGAAACCGTGTCTTGGATGTTCTGCAAAACATGACAGGGTTGGCTACTTTGTATGATTATTCGCGAAAAGCTCCGTATGAAGATGAATTGGTTGCTAAGTTCTTGAACATTGGTGCGGTGAGGAAGGCCTTAGGAGTGAAAGTTGATGAATCGTTTGTTTACGAGAAATGCAGTAAGATTGTTTGGGCTGCATTGTATGCTGATTTGATGAAAAGTGTGAAGTATATGGTAGAGAAGTTGTTGAAGAAGGAGATGAGGGTTTTGTTGTATCAAGGTCAGCGCGATTTGAGAGTCGGTGTGGTTCAAGTAGAGGCTTGGGTGAAGAGTATGAAGTGGGAAGGGATTGAGGAGTTTGTGAATGGTGAGAGGGAGATTTGGAAGGTGAATGGAGAGGTAGCTGGTTATGTGCAGAAATGGAAGTCACTTGGTAATGTTGTGGTTTTAGGGGGTGGACATCTTGTGCCTAGTGATCAACCTTTGAATTCACAAGTGATGATTGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGTTGGAACTAAATGTATCCACAAATTTTGTGTATGATGGATGA 1368 0.4174 MKMEKDSTTLFINTLRFFFFLQFQSFLSLSDSSLFPIEALPTKSGYLPISPTSTSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFYELGPYLVTNSLTLQPNPSSWNRIFGLLFLDNPIGTGFSVASTLEEIPTNQNAVAEHLFAAITRFVQLDHVFKHRPIYITGESYAGKYIPAIACYILEKNNVLKDNERVNLAGVAIGNGLTDPVTQMVTHADNAYYVGLINEGQKHELEKLQLEAVELVERRNWSEATRARNRVLDVLQNMTGLATLYDYSRKAPYEDELVAKFLNIGAVRKALGVKVDESFVYEKCSKIVWAALYADLMKSVKYMVEKLLKKEMRVLLYQGQRDLRVGVVQVEAWVKSMKWEGIEEFVNGEREIWKVNGEVAGYVQKWKSLGNVVVLGGGHLVPSDQPLNSQVMIEDWVLEKGLFGSVLELNVSTNFVYDG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0111 455 Coils Coil 234 254 - -
Psa2g0111 455 PANTHER CARBOXYPEPTIDASE 28 441 - -
Psa2g0111 455 ProSitePatterns Serine carboxypeptidases, histidine active site. 405 422 IPR033124 GO:0004185
Psa2g0111 455 Pfam Serine carboxypeptidase 41 433 IPR001563 GO:0004185|GO:0006508
Psa2g0111 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Psa2g0111 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Psa2g0111 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Psa2g0111 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Psa2g0111 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 441 IPR001563 GO:0004185|GO:0006508
Psa2g0111 455 SUPERFAMILY alpha/beta-Hydrolases 42 434 IPR029058 -
Psa2g0111 455 Gene3D alpha/beta hydrolase 29 439 IPR029058 -
Psa2g0111 455 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0111 Psa-Chr2 4003245 4004612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0111 294 433 Calmodulin-binding Proteins AT2G22960 23.404 8.78e-09 53.5