Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0097 ATGCCTGCTGAGAATTGGGACGGTGAAGGTGAGCCATTCGTTGAAACCGATCCAACAGGAAGATTCGGTCGTTACAGTGATTTACTCGGTTACGGTGCTGTGAAGAAAGTCTACAGAGGTTTTGATCAAGAAGAAGGAATCGAAGTTGCATGGAATCAAGTTCGGCTTAGGAATTTCAGCAACGATCCTGTTCTTATCAATCGTCTTCATTCCGAAGTTGAATTGCTCAGGAATTTAAGTAACAAGTTCATCATTGTTTGTTATAGTGTTTGGAAAGACGATGATCGTGGTAATATCAATTTTATTACTGAGGTTTGTACGTCGGGGAATCTTAGGGATTATCGGAAGAAGCATCGGCATGTTTCCATTAAGGCCTTTAAGAAATGGTCGAAACAGGTTCTTGAGGGGTTGGAGTATCTTCATACGCACGAGCCTTGCATTATTCATAGGGATCTTAATTGCAGTAACATCTTTGTTAATGGAAACATTGGTCAGGTGAAAATTGGTGACCTGGGATTGGCTGCCATAGTGGGAAGAAGCCATGCAGCACATTCAATTCTAGGGACTCCTGAGTATATGGCACCTGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTCGAAATGGTTACAATGGAGATACCATACAGTGAATGTGACAGTGTAGCCAAGATATACAAAAAGGTCACTATGGGAATCAAGCCTCAAGCCTTGAGCAATGTCAGAGATCTAGAAGTGAAAGCATTCATTGAGAAATGCATAGCACAACCAAGGGCAAGACCTTCAGCCACTGATCTTCTTCAGGATCCTTTCTTTTTTGAACTCAACAATGGAGGTCAATGTTTAAACCGACTCAAAACTGTCGTATTTATGACAAGTTGGCACAACTGTTGTAGCAAATATGTGCTGGAAAGCACCAACCGTCGAATCTATTGGCTGTCTTCTTAG 975 0.4174 MPAENWDGEGEPFVETDPTGRFGRYSDLLGYGAVKKVYRGFDQEEGIEVAWNQVRLRNFSNDPVLINRLHSEVELLRNLSNKFIIVCYSVWKDDDRGNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIKPQALSNVRDLEVKAFIEKCIAQPRARPSATDLLQDPFFFELNNGGQCLNRLKTVVFMTSWHNCCSKYVLESTNRRIYWLSS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0097 324 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0097 324 SUPERFAMILY Protein kinase-like (PK-like) 17 281 IPR011009 -
Psa2g0097 324 Gene3D Phosphorylase Kinase; domain 1 8 104 - -
Psa2g0097 324 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 285 - -
Psa2g0097 324 Gene3D Transferase(Phosphotransferase) domain 1 106 286 - -
Psa2g0097 324 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0097 324 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 4 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0097 Psa-Chr2 2980750 2984128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0097 7 281 MAP Kinase Kinase Kinase AT5G55560 76.364 1.67e-164 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa2g0097 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0097 K08867 - gmx:100798280 533.102