Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0080 ATGGAGAAAGTATCAGATGAAGAAGCTTTCCTTTTCGCTTTGGAACTATCATTTGCTTCTTCTGTTCCAATGGTTCTGAAAACAGCTTTGGAACTTGGCATCATTGAAATTATAGCCAAATCTGGTCCTAATGCATACCTTTCATCTTCTCAAATTGCTTCTCAAATTCCTGGTATAAAAAATCCAGAAGCACCTTCTATGTTGGACAGATTGTTGCGTCTTTTATCTAGCTATAAAATTCTGACATGCTCCGTTCAACAAGTTGATGGAGATTGTAACGAAGAAAGATTGTATGGTGTTCACCCTTTAGCTAAATACTTTGTCGAAAATAATAATGAAGATGAAGATGAAGATGGTGCCTCCATGATTTCCTTCTTTCTCATGCAACACGACAAAGTTCTCAAAGACGTGTGGTACCACTTAACAAATTCAATTAAAGAGGGTGGAATTCCATTTAACAACACTTTTGGAATGAATACTTTTGAGTTTCATGGCATAAATCCAAGGATCAACAAGCTTTTCAATAATGCCATGTCTGATCGCTCTTGCATCATAATGAAAAATATTCTGGTGACATATTCAGGTTTTGAGGGTCTTGGATCTATTGTTGATGTTGGTGGTGGGATTGGAACTATTGCTAATATGATTGTCTCTAAGTATCCCAACATTAAAGCCATTAACTTTGACTTGCCACATGTTATCAATGAAGCTCCTTCTCATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTGAGTGTTCCAAAAGCTGATGCCATTTTCATGAAGTCGATTTGTCATGATTGGAATGAAGAGCAATGTTTGAAAATTTTGAAGAATTGTTATGATTCACTTCCGGTCATTGGGAAGGTGATAGTAGTTGAATCCATAGTTCCAGTAATTCCAAACTCAAACTTATCCTCAAAATCTGTGTTTCAAATGGATGTTACCATGTTGTCTTATACCTCTGGTGGAAAAGAGAAAACAAAGAAAGAGTATGAAGGCTTGGCTAAGGGGGCAGGATTTCAAGGATTCCAAATTGCATGTTGTGTGTCAATCGTAATTTATGGAATCTTAAAGAATGCTTAA 1089 0.3682 MEKVSDEEAFLFALELSFASSVPMVLKTALELGIIEIIAKSGPNAYLSSSQIASQIPGIKNPEAPSMLDRLLRLLSSYKILTCSVQQVDGDCNEERLYGVHPLAKYFVENNNEDEDEDGASMISFFLMQHDKVLKDVWYHLTNSIKEGGIPFNNTFGMNTFEFHGINPRINKLFNNAMSDRSCIIMKNILVTYSGFEGLGSIVDVGGGIGTIANMIVSKYPNIKAINFDLPHVINEAPSHPGVEHVGGDMFVSVPKADAIFMKSICHDWNEEQCLKILKNCYDSLPVIGKVIVVESIVPVIPNSNLSSKSVFQMDVTMLSYTSGGKEKTKKEYEGLAKGAGFQGFQIACCVSIVIYGILKNA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0080 362 SUPERFAMILY "Winged helix" DNA-binding domain 5 111 IPR036390 -
Psa2g0080 362 Pfam O-methyltransferase domain 138 343 IPR001077 GO:0008171
Psa2g0080 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 350 IPR029063 -
Psa2g0080 362 Pfam Dimerisation domain 24 76 IPR012967 GO:0046983
Psa2g0080 362 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Psa2g0080 362 CDD AdoMet_MTases 202 294 - -
Psa2g0080 362 Gene3D - 1 107 IPR036388 -
Psa2g0080 362 PANTHER BNAA10G07270D PROTEIN 3 351 - -
Psa2g0080 362 Gene3D Vaccinia Virus protein VP39 114 359 IPR029063 -
Psa2g0080 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 362 IPR016461 GO:0008168
Psa2g0080 362 PANTHER O-METHYLTRANSFERASE 3 351 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0080 Psa-Chr2 2265306 2306493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0080 3 349 Monolignol Biosynthesis Gene Families AT5G54160 59.366 2.82e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0080 K13066 - pop:7493466 424.091