Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0079 ATGGAGAAAGTATCAGATGAAGAAGCTTTCCTTTTTGCTATGGAACTATCATTTGCTTCTTCTGTTCCAATGGTTCTAAAAACAGCTTTGGAACTTGGCATCATTGAAGTTATAGCAAAAGCTGGTCCTAATGCATACCTTTCGTCTTCTCAAATTGCTTCTCAAATTCCTGGTATAAAAAATCCAGATGCACCTTCTATGTTGGATAGATTGTTGCGTCTTTTGGCTAGCTACAAAATTCTTACATGCTCCGTTGAACAAGTTGATGGAGATTATAATGAAGAAAGATTGTATGGTGTTCACCCTTTAGCTAAATACTTTGTCGAAAATAATAATGAAGATGGCGCCTCCATGGTTTCCTTCTTTCTCATGCAGCACGACCAGATCCTCCAAGACATGTGGTACCACATAACAAATTCTATTAAAGAGGGTGGACTTCCATTTAACAATGCTTTTGGAATGACTGTTTTTGAGTTTCATGGCACAAATCCAAGGTTTAACAACCTTTTCAACAAGGGCATGTCTGATTCCTCTAGTATCATAATGAAGAAAATTCTTGAGATATATTCAGGTTTTGAGGGTGTTAGTTCTTTTGTTGATGTTGGTGGTGGCATTGGAACTGTTACTAACATGATTGTCTCTAAGTATCCCAACATTAAAGCCATTAACTTTGACTTGCCACATGTCATTAGTGAAGCTCCATCTTATTCAGGTGTGGAACATGTTGGTGGAGACATGTTTGTGAGTGTTCCAAAAGGTGATGCTATTTTCATGAAGTGGTTATGTCATGATTGGAATGATGAGCAATGCTTGAAAATATTGAAGAATTGTTATGATTCACTTCCTGTCATTGGGAAGGTGATAGTATTTGAATCCATAGTTCCAGTAGTTCCAAACTCAAACTTGGCCTCAAAACATGTCCTTCAAATGGATGTTATAATGTTGTGTCATAGTTCAGGTGGAAAAGAGAGAACACAGAAAGAGTTTGAGGCTTTGGCTAAGGGAGCTGGATTTCAAGGTTTTCAAATTGCATGTTGTGTTTTCAATATGTATGTTATGGAATTTCTTAAGAATGCTTAA 1080 0.3694 MEKVSDEEAFLFAMELSFASSVPMVLKTALELGIIEVIAKAGPNAYLSSSQIASQIPGIKNPDAPSMLDRLLRLLASYKILTCSVEQVDGDYNEERLYGVHPLAKYFVENNNEDGASMVSFFLMQHDQILQDMWYHITNSIKEGGLPFNNAFGMTVFEFHGTNPRFNNLFNKGMSDSSSIIMKKILEIYSGFEGVSSFVDVGGGIGTVTNMIVSKYPNIKAINFDLPHVISEAPSYSGVEHVGGDMFVSVPKGDAIFMKWLCHDWNDEQCLKILKNCYDSLPVIGKVIVFESIVPVVPNSNLASKHVLQMDVIMLCHSSGGKERTQKEFEALAKGAGFQGFQIACCVFNMYVMEFLKNA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0079 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 354 IPR029063 -
Psa2g0079 359 Gene3D Vaccinia Virus protein VP39 110 357 IPR029063 -
Psa2g0079 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 357 IPR016461 GO:0008168
Psa2g0079 359 PANTHER BNAA10G07270D PROTEIN 3 358 - -
Psa2g0079 359 SUPERFAMILY "Winged helix" DNA-binding domain 5 111 IPR036390 -
Psa2g0079 359 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Psa2g0079 359 Gene3D - 1 107 IPR036388 -
Psa2g0079 359 PANTHER O-METHYLTRANSFERASE 3 358 IPR016461 GO:0008168
Psa2g0079 359 Pfam O-methyltransferase domain 134 339 IPR001077 GO:0008171
Psa2g0079 359 Pfam Dimerisation domain 24 76 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0079 Psa-Chr2 2257974 2261740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0079 3 358 Monolignol Biosynthesis Gene Families AT5G54160 59.270 3.15e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0079 K13066 - rcu:8282965 480.715