Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0078 GTGTGGAACATGTTGGTGGAGACATGTTTGTGAGTGTTCCAAAAGGTGATGCTATTTTCATGAAGTGGTTATGTCATGATTGGAATGATGAGCAATGCTTGAAAATATTGAAGAATTGTTATGATTCACTTCCAGTCACTGGGAAAGTGATACTACTTGAATCCATAGTTCCAGTAGTTCCAAACTCAAATTTGGCCTCAAAACATGTTCTTCAAATGGATGTTATGATGTTGTGTCATAGTTCAGGTGGAAAAGAGAGAACACATAAAGAATTTGAGGCTTTGGCTAAGGGAGTTGGATTTCAAAGTTTCCAAATTGCATGTTGTGCTTTCAAATATGTATGTTATGGAATTTATTAA 359 0.3565 VEHVGGDMFVSVPKGDAIFMKWLCHDWNDEQCLKILKNCYDSLPVTGKVILLESIVPVVPNSNLASKHVLQMDVMMLCHSSGGKERTHKEFEALAKGVGFQSFQIACCAFKYVCYGIY* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0078 118 PANTHER BNAA03G48770D PROTEIN 1 109 - -
Psa2g0078 118 Pfam O-methyltransferase domain 1 101 IPR001077 GO:0008171
Psa2g0078 118 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 118 IPR016461 GO:0008168
Psa2g0078 118 PANTHER O-METHYLTRANSFERASE 1 109 IPR016461 GO:0008168
Psa2g0078 118 Gene3D Vaccinia Virus protein VP39 1 116 IPR029063 -
Psa2g0078 118 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 110 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0078 Psa-Chr2 2241390 2241857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0078 1 110 Monolignol Biosynthesis Gene Families AT5G54160 66.364 8.32e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0078 K13066 K05279 rcu:8282965 179.874