Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0077 ATGGAGAAAATATCAGATGAAGAAGCTTTCCTTTTTGCTATGGAACTAGCATGTGCTTCTTCTGTTCCAATGGTTCTGAAAACAGCTTTGGAACTTGGCATCATTGAAGTTATATCAAAAGCTGGTCCTAATGCATACCTTTCATCTTCTAACATTGCTTCTCAAATTCCTGGTATAAAAAATCCAGATGCAGCTTCTATGTTGGATAGATTGTTGCGTCTTTTGGCTAGCTACAAAATTCTGACATGCTCCATTGAACAAGTTGATGGAGATTGTAATGAAGAAAGATTGTATGGTGTTCACCCTTTAGCTAAATACTTTGTCGAAAATAATAATGAAGATGAAGATGGTGCCTCCATGATTTCTTTCTTTCTCATGCTACACGACAAAGTTCTCAAAGATGTGTGGATCAAATCCTATCTTTTATTGGATTTTTCGGAACTGGATTAA 450 0.36 MEKISDEEAFLFAMELACASSVPMVLKTALELGIIEVISKAGPNAYLSSSNIASQIPGIKNPDAASMLDRLLRLLASYKILTCSIEQVDGDCNEERLYGVHPLAKYFVENNNEDEDGASMISFFLMLHDKVLKDVWIKSYLLLDFSELD* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0077 149 PANTHER O-METHYLTRANSFERASE 11 137 IPR016461 GO:0008168
Psa2g0077 149 Pfam Dimerisation domain 24 76 IPR012967 GO:0046983
Psa2g0077 149 Gene3D - 1 107 IPR036388 -
Psa2g0077 149 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 149 IPR016461 GO:0008168
Psa2g0077 149 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 11 137 - -
Psa2g0077 149 SUPERFAMILY "Winged helix" DNA-binding domain 5 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0077 Psa-Chr2 2231331 2232448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0077 3 136 Monolignol Biosynthesis Gene Families AT5G54160 49.254 3.96e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0077 K13066 - rcu:8282965 140.584