Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0044 ATGACAACAATTAATCCACAGGATGACTCAAACTTGATTATTGACTCAATCTCAGACCCTTTGAACTGGAATTCAGCTGCAAATTCACTCAAGGGTAGCCACTACGATGAAGTGAAACGCATGGTGGCAGAGTATAAGAAACCAGTGATCTGTCTTGGTGGAGTGGAAACACTAACTATATCTAAGGTTGCTGCTGTTGCTAACACTAACTCACATGTTAAGGTTGAACTCTCAGAGTCTGCGAGAGCCGGTGTTGAAGCCAGCTGCGAGTGGATCGCGGAAAACATTAAAAAAGGCACTGCCATTTATGGTGTTACCACTGGCTTTGGTGCTGCCTCTCATAGAAGAACTCAACAAGGCTTAGCTCTTCAGAAGGAGATGGTTAGGTTTCTAAACTGCGCAATATTTGGGCGTGAAACTGAGTTGTCTCATACATTACCTCAGTCAGCAACAAGAGCAGCTATGCTTGTGAGGGTTAATACCCTTCTTCAAGGCTATTCAGGCATTAGATTTGAAATCTTAGAAGCTATCACAAAACTGCTCAACAGTAATGTCACCCCAGTCTTGCCATTACGTGGTACAGTTACCGCTTCCGGTGATCTAATTCCACTGTCCTACATCGCTGCATTGCTAACTGGTAGGCGAAATTCCAGAGCTGTTGGACCCTCAAAAGAGTCCCTTAATGCCAAGGAAGCTTTCCATTTAGCAGGTTTGAGTTCTGGTTTCTTCGAGTTGAAGCCGAAAGAAGGCCTTGCTCTTGTAAATGGCACAGCTGTTGGATCTGGTGTCGCTTCTACGGTGCTTTTTGAGGCAAACATATTAGCTTTGTTGTCAGTCGTTCTATCTGCAGTTTTTACCGAAGTCATGCAAGGGAAGCCGGAGTTTACACATCATCTTATACACAAACTGAAGTTCCATCCGGGTCAAATCGAAGCTGCTGCTATTATGGAACACATTTTAGACGGAAGCTCTTATATCAAAAACGCAAAACTACAGCAGCCAGATCCATTGCAGAAGCCTAAAAAAGATCGTTATGCTCTTGTAACTTCTCCGCAGTGGCTCGGTCCACAAATTGAAGTCATCCGGTTTTCAACCAAATCAATTGAAAGGGAGATAAATTCCGTGAATGACAATCCTCTGATTGATGTCACAGCGGATAAGGCACTGAATGGTGGTAACTTCCAAGGCACCCCAATTGGAGTTTCGATGGATAACGTACGTCTAGCTATTGCTTCAATTGGAAAACTCATCTTTGCGCAGTTTACTGAGCTCGTCAATGACTTGTACAATAATGGGTTGCCATCAAATCTTTCTGCTGGTAGAAACCCAAGTCTTGATTATGGTTTTAAGGCTTCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATTTAGCAAATCCTGTAACAAGCCATGTGCAAAGTGCTGAGCAGCATAACCAGGATGTGAACTCTTTGGGGTTGATTTCTGCTTTGAAAACTGTGGAAGCCATTGAGTTATTGAAGCTCATGGCTTCCACATATTTGGTTGCACTCTGTCAAGCTATTGACTTGAGGCATTTGGAGGAAATATTTAAGAACACTATCAGAAACACTGTAAGCAGAGCTGCAAAGAAGACATTAATCATAGATGACAAAGAAGAAACTAATCCATTTAGAAACTGTGAGGAAAATTTGCTCAAAGTGGTTGATAGAGAATACGTATTCTCCTACATAGACGATCCCTTTAATGTTACGTACCCGTTGATGCCGAAACTGAAGCAAGTACTTTATGAGCACGCACATATCAGTGCTATTAATGATAAGAATGCAAGCTTGTCGATATTTGAGAAGATAGGAGCTTTTGAGGAAGAATTGAAGTCTCTGTTGCCAAAGGAAGTTGAAAATGCAAGGGTGGCATTTGAGAATGGAAATCCAGAAATTCCAAACAGAATTAAGGAATGTAGGTCATACCCATTATACAAGTTTGTGAGGGAAGAATTAGGGATAGGGCTGCTGACAGGAGAAAAGGATGTCACACCAGATGAGGAATTTGAGAAAGTTTTTACAGCAATGTGTCAAGCAAAGATTGTTGATCCAGTTTTGGAATGTCTTGGTGATTGGAAAGGAGTTCCAATTCCAATATAA 2130 0.4178 MTTINPQDDSNLIIDSISDPLNWNSAANSLKGSHYDEVKRMVAEYKKPVICLGGVETLTISKVAAVANTNSHVKVELSESARAGVEASCEWIAENIKKGTAIYGVTTGFGAASHRRTQQGLALQKEMVRFLNCAIFGRETELSHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNSNVTPVLPLRGTVTASGDLIPLSYIAALLTGRRNSRAVGPSKESLNAKEAFHLAGLSSGFFELKPKEGLALVNGTAVGSGVASTVLFEANILALLSVVLSAVFTEVMQGKPEFTHHLIHKLKFHPGQIEAAAIMEHILDGSSYIKNAKLQQPDPLQKPKKDRYALVTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVTADKALNGGNFQGTPIGVSMDNVRLAIASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAIELLKLMASTYLVALCQAIDLRHLEEIFKNTIRNTVSRAAKKTLIIDDKEETNPFRNCEENLLKVVDREYVFSYIDDPFNVTYPLMPKLKQVLYEHAHISAINDKNASLSIFEKIGAFEEELKSLLPKEVENARVAFENGNPEIPNRIKECRSYPLYKFVREELGIGLLTGEKDVTPDEEFEKVFTAMCQAKIVDPVLECLGDWKGVPIPI* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0044 709 Gene3D - 523 644 IPR023144 -
Psa2g0044 709 CDD PAL-HAL 56 520 IPR001106 -
Psa2g0044 709 PANTHER HISTIDINE AMMONIA-LYASE 1 709 IPR001106 -
Psa2g0044 709 Gene3D - 12 257 IPR024083 -
Psa2g0044 709 Pfam Aromatic amino acid lyase 58 522 IPR001106 -
Psa2g0044 709 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 19 699 IPR005922 GO:0005737|GO:0006559|GO:0016841
Psa2g0044 709 PANTHER PHENYLALANINE AMMONIA-LYASE 1 709 - -
Psa2g0044 709 SUPERFAMILY L-aspartase-like 19 709 IPR008948 GO:0003824
Psa2g0044 709 Gene3D Fumarase/aspartase (Central domain) 258 704 - -
Psa2g0044 709 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0044 Psa-Chr2 1457833 1460620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0044 11 709 Monolignol Biosynthesis Gene Families AT2G37040 72.286 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0044 K10775 - gmx:100787872 1215.29