Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0042 ATGGCTACACAAGCTCTAGTGTCGTCATCATCTCTTACTTTTGCAGCTGAGGCTGTGAGACAGAGCTTTAGAGCAAGATCACTTCCTTCATCAGTTGGATGTTCTAGAAAAGGTTCCTTTCTTGTCAGGGCAGCTGCTACTCCTCCTGTCAAGCAAGGTGGAGTTGATAGACCCTTGTGGTTTGCTTCAAAGCAAAGTCTTTCTTACTTGGATGGAAGCCTACCCGGTGACTACGGATTTGACCCTCTAGGACTATCGGATCCCGAAGGAACAGGAGGTTTCATTGAGCCAAGATGGCTAGCATATGGCGAGGTAATCAACGGTCGCTTCGCAATGTTGGGAGCAGTCGGGGCTATAGCACCCGAATATCTCGGGAAAGTCGGTTTGATCCCACAGGAAACAGCCCTCGCTTGGTTCCAAACGGGCGTGATCCCACCTGCAGGAACATACAACTACTGGGCAGACAATTACACACTCTTCGTCTTGGAAATGGCACTGATGGGATTCGCGGAACACAGAAGATTCCAAGATTGGGCCAAACCTGGTTCCATGGGAAAACAATACTTCCTAGGACTTGAAAAAGGTTTCGGAGGTTCTGGCAACCCTGCATACCCTGGCGGACCTTTCTTTAACCCTCTCGGTTTCGGTAAAGATGAGAAATCTTTGAAGGAGTTGAAGCTTAAGGAAGTGAAAAATGGAAGGTTAGCTATGTTGGCAATATTGGGATACTTCATTCAAGGTCTTGTTACAGGAGTTGGACCATACCAAAACTTGTTAGATCATGTGGCTGATCCTGTCAACAACAATGTCTTGACAAGTCTCAAGTTTCATTGA 834 0.4688 MATQALVSSSSLTFAAEAVRQSFRARSLPSSVGCSRKGSFLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0042 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 276 IPR001344 GO:0009765|GO:0016020
Psa2g0042 277 SUPERFAMILY Chlorophyll a-b binding protein 55 273 - -
Psa2g0042 277 Gene3D Chlorophyll a/b binding protein domain 59 276 - -
Psa2g0042 277 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 8, CHLOROPLASTIC 1 276 - -
Psa2g0042 277 Pfam Chlorophyll A-B binding protein 68 246 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0042 Psa-Chr2 1441453 1444264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0042 1 277 Chloroplast and Mitochondria Gene Families AT1G61520 84.838 1.72e-165 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0042 K08909 - gmx:100784090 486.108