Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0035 ATGGGTTGTTGCCAATCCTCTTTGTTCACAAGAGTAAAAGAAACTGAAAATAATCCTCTAGAAAAAGAACCACAACAACAACCACAACCCTATCACCAATTTCATACCAGTAACAACACTTCGAACGAAACGGGGAAGGATTTTTCAGATCCTTCTTCGTTTACGTTCTCGGAATTTTCACTTTCCGACTTGAAATCAGCTACGAATAATTTCAGTTCGGAGTATATAGTTTCCGAGAGCGGCGAAAAGGCACCGAACTTGGTTTATAAAGGTAGGTTACAGAATCAGAAGCGGTGGATTGCGGTTAAGAAGTTCAGTAAAGCTGCTTGGCCGGATCCGAAGCAGTTTGTTGAAGAAGCTTCCGGTGTTGGGAAATTGCGTCATGCTAGGCTTGCTAATTTGATCGGTTATTGTTGTGATGGTGATGAGAGGTTACTCGTTGCTGAGTTTATGCCTAATGATACTCTCGCTAAACACCTTTTTCACTGGGAAAATCAGACGATTGAGTGGGCCATGCGGTTGAGAGTTGCTCTTTATATTGCACAAGCTTTGCATTATTGTACTTCTGAGGGTCGTCCTTTGTATCATGATTTGAATGCTTATCGCGTTCTTTTCGATGAGGAAGGGGATCCGCGTCTTTCTTGTTTTGGTTTAATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAATATTTAAGAAATGGAAGGGTTACCCCTGAAAGTGTAATTTACAGCTTTGGAACTGTTCTTCTTGACCTACTGAGTGGAAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGTAAAAACAACATGCTCTTGATGGATTCTCATTTGGAGGGAAAATTTTCTACAGAAGAGGCAACAGTGGTGGTCAATCTTGCCTCTAAATGTTTGCAATATGAACCGCGAGAGCGGCCTAATACAAAGGATTTGGTCACAACACTTGCTCCATTGCACACTAAACCCGAAGTTCGTTCTCACATCATGCTTGGAATTCCGAAGCAAGAGGAAGCTCCATCTACCCCACAACGTCCTCTGTCCGCAATGGGCGAGGCTTGCTCAAGAATGGACCTCACTGCAATACATCAGATCTTAGTTGCAACACACTACAGAGATGATGAAGGGACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTCGAGGCAAGGAAACGTGGGGACTATGCATTCCGTGACAAGGATTTTAAGACAGCCATTGATAACTATTCCCAGTTCATTGATGTGGGGACGATGGTCTCACCCACAGTTTTTGCTAGGCGAAGTCTATGCTATCTGTTATGCGATCAACCAGATCCTGCTCTACGAGATGCAATGCAAGCACAATGCGTTTATCCAGACTGGCCCACGACTTTCTACATTCAGTCAGTTGCTCTTGCAAAGCTGAACATGCACAAGGATGCAGCTGACATGTTAAATGAGGCAGCTGCATTGGAAGAAAAGAGGCAACGAGGAGCGAGAGGTTCATAG 1536 0.4368 MGCCQSSLFTRVKETENNPLEKEPQQQPQPYHQFHTSNNTSNETGKDFSDPSSFTFSEFSLSDLKSATNNFSSEYIVSESGEKAPNLVYKGRLQNQKRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHARLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVALYIAQALHYCTSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPNTKDLVTTLAPLHTKPEVRSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTTFYIQSVALAKLNMHKDAADMLNEAAALEEKRQRGARGS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0035 511 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATED 1 510 - -
Psa2g0035 511 MobiDBLite consensus disorder prediction 1 47 - -
Psa2g0035 511 Gene3D Tetratricopeptide repeat domain 400 509 IPR011990 GO:0005515
Psa2g0035 511 SUPERFAMILY TPR-like 403 504 IPR011990 GO:0005515
Psa2g0035 511 Gene3D Phosphorylase Kinase; domain 1 46 150 - -
Psa2g0035 511 Gene3D Transferase(Phosphotransferase) domain 1 152 343 - -
Psa2g0035 511 ProSiteProfiles Protein kinase domain profile. 74 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0035 511 SUPERFAMILY Protein kinase-like (PK-like) 50 331 IPR011009 -
Psa2g0035 511 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 510 IPR045845 GO:0004672|GO:0009742
Psa2g0035 511 MobiDBLite consensus disorder prediction 21 47 - -
Psa2g0035 511 Coils Coil 483 503 - -
Psa2g0035 511 Pfam Protein tyrosine and serine/threonine kinase 88 326 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0035 Psa-Chr2 1323243 1332761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0035 39 334 Glycoside Hydrolase AT3G07070 34.277 6.72e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Psa2g0035 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0035 K14500 - gmx:100808907 915.99