Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0022 ATGGGAACTTGCTGGAGTTCTCTTCCACCTAGCAATCATCCAACTCCATCTCCAACCGGAACTGTTACACCTGCAGGAACATGTAATTCTCAGACAACAAGTGGAAGCTATGGTACTAGCACCACAACTACCACTAGAACTACAACTTTTAATTCTTCTACTACTACTTCTTCTGGAAGTGGAAGCAGTAATAACATGTCTTCCTCCATAAACAGCCACCATGATTATTCAATCGGTGGTCAGATCCTACCTACTTCTAATTTGAGAGTCTACACTTTTGCCGAATTGAAAGCTTCTACCAAGAATTTCAAACCTGAAACACTTCTTGGAGAAGGAGGTTTTGGAAAAGTTTATAGAGGATGGCTTGATGGAATCACCATTGCCGTCAAAAAATTGAACTCCGAAGGTTACCAAGGTCTCCAGGAGTGGCAGTCAGAAATACATTTTCTAGGTCGACTTTACCATCCTAACCTTGTGAAACTCTTGGGATATTGTTATGAGGACACAGAGCTTCTTCTTGTTTATGAATACATGCAGAAGGGTAGTTTGGAAAATCACCTCTTTGGAAGGGGTGCTGTTGTTCAACCACTTCCTTGGGAGCTTAGGCTTAAGATAGCAATTGGAGCGGCTAGTGGTCTTTCATTCTTGCATACATCAGATAGAGAAATTATTTACAGAGATTTTAAGGCTTCTAATATATTGCTTGATGGGTCCTATAATGCAAAGATATCAGATTTTGGGTTGGCAAAGTTGGGTCCTTCCGCTAGTCAATCGCATTTGTCGACAACGGTGATGGGAACACCAGGTTATGCAGCTCCTGAATATATGCAAACAGGGCATCTATATGTAAAGAGTGATGTGTATGGTTTTGGAGTTGTTTTGGTTGAGATACTGACGGGCTTAAGAGCGATTGATCTCAACCGGCCAAGCGGGTATCACAATCTAACGGATTGGATCAAACCGCACCTACAGGAAAGAAGAAAATTGAAGAAGATTATGGATCCTCAATTGGGAGACAAATATCCAATCAAAGCTGCACTAACTATATCTAAGCTTGCTTCAAAATGTCTTGCACCTGAGCCCAAAATGCGCCCATCCATGAAGGATGTTATGGAGATCTTGAAAGGAACTCAAGCTTCCACTGACAAAACCGTCGAGGTTAGGGGTCAAAGTGAATGA 1179 0.4182 MGTCWSSLPPSNHPTPSPTGTVTPAGTCNSQTTSGSYGTSTTTTTRTTTFNSSTTTSSGSGSSNNMSSSINSHHDYSIGGQILPTSNLRVYTFAELKASTKNFKPETLLGEGGFGKVYRGWLDGITIAVKKLNSEGYQGLQEWQSEIHFLGRLYHPNLVKLLGYCYEDTELLLVYEYMQKGSLENHLFGRGAVVQPLPWELRLKIAIGAASGLSFLHTSDREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTTVMGTPGYAAPEYMQTGHLYVKSDVYGFGVVLVEILTGLRAIDLNRPSGYHNLTDWIKPHLQERRKLKKIMDPQLGDKYPIKAALTISKLASKCLAPEPKMRPSMKDVMEILKGTQASTDKTVEVRGQSE* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0022 392 MobiDBLite consensus disorder prediction 18 68 - -
Psa2g0022 392 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 40 378 - -
Psa2g0022 392 SUPERFAMILY Protein kinase-like (PK-like) 81 374 IPR011009 -
Psa2g0022 392 Gene3D Transferase(Phosphotransferase) domain 1 178 391 - -
Psa2g0022 392 Pfam Protein kinase domain 106 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0022 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Psa2g0022 392 PANTHER OS01G0588500 PROTEIN-RELATED 40 378 - -
Psa2g0022 392 MobiDBLite consensus disorder prediction 1 68 - -
Psa2g0022 392 Gene3D Phosphorylase Kinase; domain 1 78 177 - -
Psa2g0022 392 ProSiteProfiles Protein kinase domain profile. 103 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0022 392 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Psa2g0022 392 CDD STKc_IRAK 109 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0022 Psa-Chr2 631654 633913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0022 77 378 Receptor kinase-like Gene Family AT4G02010 49.673 3.96e-97 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa2g0022 Pkinase 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0022 - - mtr:MTR_5g099130 584.334