Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0021 ATGGGAACTTGCTGGATTCTCTTCCACCTAGCAATCATCCAACTCCATTCCAACCGGAACTGGTTTGGAAAAGTTTATAGAGGATGGCTTGATGGAATCACCATTGCCGTCAAAAAATTGAACTCCGAAGGTTACCAAGGTCTCCAGGAGTGGCAGTCAGAAATACATTTTCTAGGTCGACTTTACCATCCTAACCTTGTGAAACTCTTGGGATATTGTTATGAGGACACAGAGCTTCTTCTTGTTTATGAATACATGCAGAAGGGTAGTTTGGAAAATCACCTCTTTGGAAATAGAGAAATTATTTACAGAGTTTTAAGGCTTCTAATATATTGCTTGATGGGTCCTATAATGCAAGATATCAGATTTTGGTTGGCAAAGTTGGGTCCTTCCGCTAGTCAATCGCATTTGTCGACAAACGGTGATGGGAACACCAGGTTATGCAGCTCCTGA 453 0.415 MGTCWILFHLAIIQLHSNRNWFGKVYRGWLDGITIAVKKLNSEGYQGLQEWQSEIHFLGRLYHPNLVKLLGYCYEDTELLLVYEYMQKGSLENHLFGNREIIYRVLRLLIYCLMGPIMQDIRFWLAKLGPSASQSHLSTNGDGNTRLCSS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0021 150 ProSiteProfiles Protein kinase domain profile. 11 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g0021 150 SMART tyrkin_6 22 139 IPR020635 GO:0004713|GO:0006468
Psa2g0021 150 Gene3D Phosphorylase Kinase; domain 1 19 87 - -
Psa2g0021 150 SUPERFAMILY Protein kinase-like (PK-like) 21 103 IPR011009 -
Psa2g0021 150 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 22 100 - -
Psa2g0021 150 PANTHER OS01G0588500 PROTEIN-RELATED 22 100 - -
Psa2g0021 150 Pfam Protein tyrosine and serine/threonine kinase 22 100 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0021 Psa-Chr2 629407 631349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0021 22 144 Receptor kinase-like Gene Family AT5G59700 37.662 7.11e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa2g0021 PK_Tyr_Ser-Thr 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0021 - - mtr:MTR_5g099130 164.851