Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g5119 ATGTCTGAAGAGGCTGGATCCATGTTGGTAGTTTACGACGATCCCTCTGACCAACACTCCCTGTCTTTGGGCGATACAAGCAGCACTGAGGAGTCACCTCCTCAAACCACACTCTCCTTGGAACCCACTCATGATCACATTCCATACATTGGTCAGAGGTTCCCCACTCATGATTCAGCTTATGATTTCTATACTGATTTCGCCAAGACCTCTGGCTTCTCAATTAGGCGCCACCGTACCGAGGGAAAAGACGGTGTTGGGAAAGGACTTACTAGACGATACTTTGTTTGTCACCGTGCTGGCAATACTCCTGCTAAATCATCCACCGAAACTAAGCCTCAAAGAAACAGAAAATCTTCTCGATGTGGTTGTCAGGCTTATATGAGGATAAGCAAAACCACCGAATTTGGACCTCCTGAATGGCGGGTTACTGGTTTTGCTAATCATCATAATCATCAACTTTTGGAACCTAACCAAGTTCGATTCCTTCCTGCCTACAGAACTATATCAGATTCTGACAAAAACAGAATCCTTATGTTTGCCAAAACAGGGATTTCTGTTCATCAAATGATGAGGCTTATGGAGCTTGAGAAGTGCGTCGAACCTGGATATTTGCCTTTTACGGAAAAGGATGTAAGGAATTTACTACAGTCCTTTAGAAAATTAGATCCCGAAGAAGAAACCCTGGATTTGTTAAAAATGTGCAGAAATATTAAGGAGAAAGATCCTAATTTTAAATTTGAGTACACACTCGATGTAAACAACCGTTTAGAGAATATTGCCTGGTCATATGCCTCGTCCGTTCAATTGTATGATATCTTTGGGGATGCTGTGGTATTTGATACAACCCATCGTCTCACTGCATTTGACATGCCACTGGGGATATGGGTTGGAATAAATAATTATGGAATGCCCTGCTTCTTTGGCTGTGTGCTACTGCGAGATGAAACTGTCAGGTCATTTTCCTGGGCAATAAAGGCTTTCTTAGGTTTTATGAATGGGAAGGCTCCACAGACTATATTAACGGACCAAAACTTGTGTCTCAAAGAAGCACTATCTGGAGAAATGCCGATAACAAAACATGCTTTCTGCATATGGATGATAGTAGCAAAATTTCCGTCATGGTTCAATGCTGTTCTAGGGGAACGCTACAATGATTGGAAGGCTGAATTTTATAGACTTTATAATCTTGAATCAGTTGATGATTTTGAACTAGGCTGGAGGGAAATGGTCTGTTCTTTTGGGCTGCATTCCAATCGGCACGTGCTTACTTTATATAGCTCGCGCTCACTTTGGGCATTGCCATATTTAAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGCCAGTCAAAGTCAATTAATGCCTTCATTCAACGGTTTTTAAGCGCGCAGACACGACTTGCTCACTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACAGGAGAACAACAAACCATGCAGCAGAATCTGCAAAATGTTTGCCTCAAAACAGGAGCTCCCATGGAATCACACGCTGCTACGGTCCTCACTCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCATCTTTTTCAGTGGAAGACGGGTTTCTTGTGAGACATCACACAAAAGTTGAAGGAGGTCGCAAAGTTTATTGGTCTACTCAAGAAGGAGTTATAAGCTGCAGCTGTCACCAGTTTGAATTTTCTGGAATTTTGTGTAGGCACTCTCTGAGAGTTCTTTCAACAGGAAATTGCTTTCAGATCCCGGATACATATCTTCCCATCCGATGGCGTCGTATCAGCGTGCCTTCTTCAAGGCTTCTTCAAAATGCATCCAGTGATCATGCCGAAAGAGTTAAGTTATTCCAAAATATGGTTTCATCTCTAGTTACAGAATCTGCCAAGTCTAAAGAACGATTAGATGTTGCTACAGAACAAGTTTCCATTCTTCTGTCTCGCATAAAAGAGCAACCAATTTCACTACAATGTGCCAGAGATATTTCTACCATTAATAGGAATCTATGA 2040 0.4186 MSEEAGSMLVVYDDPSDQHSLSLGDTSSTEESPPQTTLSLEPTHDHIPYIGQRFPTHDSAYDFYTDFAKTSGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPAKSSTETKPQRNRKSSRCGCQAYMRISKTTEFGPPEWRVTGFANHHNHQLLEPNQVRFLPAYRTISDSDKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEETLDLLKMCRNIKEKDPNFKFEYTLDVNNRLENIAWSYASSVQLYDIFGDAVVFDTTHRLTAFDMPLGIWVGINNYGMPCFFGCVLLRDETVRSFSWAIKAFLGFMNGKAPQTILTDQNLCLKEALSGEMPITKHAFCIWMIVAKFPSWFNAVLGERYNDWKAEFYRLYNLESVDDFELGWREMVCSFGLHSNRHVLTLYSSRSLWALPYLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATVLTPFAFSKLQEQLVLAAHYASFSVEDGFLVRHHTKVEGGRKVYWSTQEGVISCSCHQFEFSGILCRHSLRVLSTGNCFQIPDTYLPIRWRRISVPSSRLLQNASSDHAERVKLFQNMVSSLVTESAKSKERLDVATEQVSILLSRIKEQPISLQCARDISTINRNL* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g5119 679 MobiDBLite consensus disorder prediction 101 120 - -
Psa1g5119 679 MobiDBLite consensus disorder prediction 19 42 - -
Psa1g5119 679 Pfam MULE transposase domain 278 370 IPR018289 -
Psa1g5119 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Psa1g5119 679 SMART 26again6 564 591 IPR006564 GO:0008270
Psa1g5119 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 673 IPR031052 GO:0006355
Psa1g5119 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
Psa1g5119 679 MobiDBLite consensus disorder prediction 1 42 - -
Psa1g5119 679 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 19 673 - -
Psa1g5119 679 Pfam SWIM zinc finger 551 587 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g5119 Psa-Chr1 371415498 371418738 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa1g5119 MULE 6e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g5119 - - gmx:100810717 1283.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g5119 1 371415498 371418738 Psa1g5119 1 371415498 371418738 ECH