Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g5098 ATGGCTCTGATCCTGCACTCTACCCAGGCAAACAGAAATTTTTACAAGATTCTGATTGCTGCAGAGTATGTTGGTGTTAAAGTTGAATTGGCACCAGATTTTCAGATGGGTGTCTCTAATAAAACCCCTCACTTTCTCAAGTTGAACCCTATTGGAAAGGTTCCGGTCTTGGAAACCCCGGAAGGTGCCGTCTTTGAGAGCAATGCAATTGCTCGTCATGTTGCCCGATTGGGTGAAAACAATTTGTTTGGATCTTCTTCCATTGGTCATTGGATTGATTTTGCTTCTTTCGAGATTGATGCCAATGTTTTGAAGTTGTTCATTCCAAGGCTTGGAAAGGCCCCCTACTTTCCTGTTGTGGAGGAGTCTGCATTTTCTTCATTGAAGAGAGCATTTGAGGCTCTTAACACTCACCTTGCGCACAATACCTACCTGGTTGGGGATTCTGTTACCCTTGCTGATATCATAACAACATGCAACTTGTGGCTTGGTTTCTCCAAAATCTTGGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAGCCAAACTTCCGAAAGATAATAGGCCAGGTTAAGCAGACTGAAGCTTTGCCACCTATTCCATCTGCTCAGAAGCCTAAGGAATCTAAGCCCAAAACTAAAGATGAATCCAAGAAAGTGGCTAAATCAGAGCCCGTAAAGCCCAAATGGAAAAGACTTTACTCTAACACTAAGACAAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGATCCAGAGGGATATTCTCTCTGGTTCTGTGATTACAAATACCAAGATGAGAATACTGTTTCTTTCGTGACACTGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCAGCGGCTCCATTTAAGGTGAAAGGGTTGTGGCTTTTCCGTGGACAGGAGATTCCAAAGTTTGTCATTGATGAATGCTATGACATGGAGCTCTATGAGTGGACCAAGGTTGACATCTCCGATGAAGCTCAGAAAGAGCGAGTTAGTCAGATGATTGAAGATTTTGAACCATTTGAGGGAGAGCGCTCTTTTGGATGCAATCATTACGTGCACCTCATATCATCCAACGCCGAGACAGATGCGACCCCTATTGCTGTTGAGGCCGAGACAGGTGTGGCCCCTATTGCTGCTGAGACCGAGACAAATGTTATCGTTATTTCCGTTGAAGTTGAGACAGGTGACGTCGAGGCTACTGCTACTAATGATACAAAGGAATTGAGAGTCCTGCTTCCCGAAACTCTCGTTCCTCCCTTCCATCACTATCTCAACAAACCCATGGCTCTGATCCTCCACGCCACCCAGACAAACAAAAATGTTTACAAGACTCTGATTGCTGCAGAGTATGTTGGTGTCAAAGTTGAATTGGCACCAGATTTTCAGATGGGTGTCTCTAATAAAACCCCTCACTTTCTCAAGTTGAACCCTATTGGAAAGATTCCGGTCTTGGAAACCCCGGAAGGTGCCGTCTTTGAGAGCAATGCAATTGCGCGTCATGTTGCTCGATTGGGTGAAAACAATTTGTTTGGATCTTCTCCCATTGATCAGGCTCATGTTGATCAGTGGATTGATTTTTCTTCATTGGAGATTGATGCCAATCTTTTGAAGTTGTATATTCCAAGACTTGGACATGCCCCCTTCATTCCTCTTGTGGAGGAGTCTGCATTTTCTTCATTGAAGAGAGCATTTGAGGCTCTTAACACTCACCTTGCCCACAATACCTACCTGGTTGGGGATTCTGTTACCCTTGCTGATATTATAACAACATCCAACATGTTGCTTGGTTTCTCCAAACTCTTGGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAATCAGCCAAACTTCCGAAAGATAATAGGCCAGGTTAAGCAGACTGAAGCTTTGCCACCTATTCCATCTGCTCAGAAGCCTAAGGAATCTAAGCCCAAAACTAAAGATGAACCCAAGAAAGTGGTTAAATCAGAGCCCGCAAAGCCCAAAGTAGAAGAAGCTGAAGAGGAGGCACCCAAGCCTAAGGCAAAGAATCCTCTTGATCTTCTTCCCCCAAGCAAGATGATATTGGATGAGTGGAAAAGACTTTACTCTAACACTAAGTCAAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGATCCAGAGGGATATTCTCTCTGGTTCTGTGATTACAAATACCAAGATGAGAATACCGTTTCTTTCGTGACACTGAACAAGGTTGGTGGGTTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCAGCGGCTCCATTTAAGGTGAAAGGGTTGTGGCTTTTCCGTGGACAGGAGATTCCAAAGTTTTCATTGGATGAATGCTATGACATGGAGCTCTATGAGTGGACCAAGGTTGACATCTCTGACGAAGCTCAGAAAGAGCGATCATTCCGTGCACCTCGTATCACCCGACACCGAGCTGTTAGAGTTGAGGCTGCTCATGCAGAGGAAGTGCAGGGTCAGACTGTTATTGACCTATATGAGGTGGTCGAGACAGATGTGAACCCTGTTGCTGATGAGATGGCCGAGACAAATGCGACTCCTATTACTGCTGAGGCCGAGACAAGTGCGGCCTCTATTGCTGCTGAGGTCGAGACAAGTGACGTCAAGGCTACTGCTACTGATGATACAAAGACCCTTCTTCTTCAGGCACTGCTCAAAAGGGGTTGA 2835 0.4501 MALILHSTQANRNFYKILIAAEYVGVKVELAPDFQMGVSNKTPHFLKLNPIGKVPVLETPEGAVFESNAIARHVARLGENNLFGSSSIGHWIDFASFEIDANVLKLFIPRLGKAPYFPVVEESAFSSLKRAFEALNTHLAHNTYLVGDSVTLADIITTCNLWLGFSKILVKSFTSEFPHVERYFWTLVNQPNFRKIIGQVKQTEALPPIPSAQKPKESKPKTKDESKKVAKSEPVKPKWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSAAPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDISDEAQKERVSQMIEDFEPFEGERSFGCNHYVHLISSNAETDATPIAVEAETGVAPIAAETETNVIVISVEVETGDVEATATNDTKELRVLLPETLVPPFHHYLNKPMALILHATQTNKNVYKTLIAAEYVGVKVELAPDFQMGVSNKTPHFLKLNPIGKIPVLETPEGAVFESNAIARHVARLGENNLFGSSPIDQAHVDQWIDFSSLEIDANLLKLYIPRLGHAPFIPLVEESAFSSLKRAFEALNTHLAHNTYLVGDSVTLADIITTSNMLLGFSKLLVKSFTSEFPHVERYFWTLVNQPNFRKIIGQVKQTEALPPIPSAQKPKESKPKTKDEPKKVVKSEPAKPKVEEAEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSAAPFKVKGLWLFRGQEIPKFSLDECYDMELYEWTKVDISDEAQKERSFRAPRITRHRAVRVEAAHAEEVQGQTVIDLYEVVETDVNPVADEMAETNATPITAEAETSAASIAAEVETSDVKATATDDTKTLLLQALLKRG* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g5098 944 Gene3D Glutaredoxin 458 531 - -
Psa1g5098 944 Gene3D Glutaredoxin 1 74 - -
Psa1g5098 944 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 543 671 IPR010987 -
Psa1g5098 944 MobiDBLite consensus disorder prediction 678 713 - -
Psa1g5098 944 SUPERFAMILY eEF1-gamma domain 714 850 IPR036433 GO:0003746|GO:0006414
Psa1g5098 944 SMART EF1G_2 221 329 IPR001662 GO:0003746|GO:0006414
Psa1g5098 944 SMART EF1G_2 712 820 IPR001662 GO:0003746|GO:0006414
Psa1g5098 944 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 458 539 IPR004045 -
Psa1g5098 944 MobiDBLite consensus disorder prediction 216 233 - -
Psa1g5098 944 MobiDBLite consensus disorder prediction 207 233 - -
Psa1g5098 944 Pfam Glutathione S-transferase, C-terminal domain 104 191 IPR004046 -
Psa1g5098 944 Pfam Glutathione S-transferase, C-terminal domain 585 653 IPR004046 -
Psa1g5098 944 SUPERFAMILY eEF1-gamma domain 224 374 IPR036433 GO:0003746|GO:0006414
Psa1g5098 944 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 81 209 IPR010987 -
Psa1g5098 944 SUPERFAMILY Thioredoxin-like 454 534 IPR036249 -
Psa1g5098 944 SUPERFAMILY GST C-terminal domain-like 83 206 IPR036282 -
Psa1g5098 944 CDD GST_N_EF1Bgamma 462 534 - -
Psa1g5098 944 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 222 381 IPR001662 GO:0003746|GO:0006414
Psa1g5098 944 SUPERFAMILY Thioredoxin-like 2 77 IPR036249 -
Psa1g5098 944 Pfam Elongation factor 1 gamma, conserved domain 712 820 IPR001662 GO:0003746|GO:0006414
Psa1g5098 944 Pfam Elongation factor 1 gamma, conserved domain 221 329 IPR001662 GO:0003746|GO:0006414
Psa1g5098 944 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Psa1g5098 944 Pfam Glutathione S-transferase, N-terminal domain 461 533 IPR004045 -
Psa1g5098 944 MobiDBLite consensus disorder prediction 668 715 - -
Psa1g5098 944 PANTHER - 1 238 - -
Psa1g5098 944 PANTHER - 458 851 - -
Psa1g5098 944 PANTHER - 238 374 - -
Psa1g5098 944 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 238 IPR044628 GO:0004364
Psa1g5098 944 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 238 374 IPR044628 GO:0004364
Psa1g5098 944 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 458 851 IPR044628 GO:0004364
Psa1g5098 944 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 222 379 IPR036433 GO:0003746|GO:0006414
Psa1g5098 944 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 713 854 IPR036433 GO:0003746|GO:0006414
Psa1g5098 944 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 713 879 IPR001662 GO:0003746|GO:0006414
Psa1g5098 944 SFLD Main (cytGST) 462 646 - -
Psa1g5098 944 CDD GST_C_EF1Bgamma_like 546 666 - -
Psa1g5098 944 Gene3D - 76 206 - -
Psa1g5098 944 Gene3D - 536 668 - -
Psa1g5098 944 CDD GST_C_EF1Bgamma_like 91 204 - -
Psa1g5098 944 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Psa1g5098 944 SUPERFAMILY GST C-terminal domain-like 536 668 IPR036282 -
Psa1g5098 944 CDD GST_N_EF1Bgamma 15 77 - -
Psa1g5098 944 SFLD Glutathione Transferase (cytosolic) 15 184 IPR040079 -
Psa1g5098 944 SFLD Glutathione Transferase (cytosolic) 462 646 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g5098 Psa-Chr1 370645919 370663519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g5098 458 850 Eukaryotic Initiation Factors Gene Family AT1G57720 72.081 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g5098 K03233 - gmx:100795680 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g5098 1 370645919 370663519 Psa1g5098 1 370645919 370663519 ECH