Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g5070 | ATGGAACTATCAGATTTGCAAAACAACAAACAGAAGAGAGGCACCACCACTTTTCCCCACCACCAACACCAACCACAACAGCAACAAGAATCTTCACCTTCCAATTCTCATTCTCAGCCGCAACAACAACAACTTGTGGTCCCTTTTGATGGAAGGCCACCACCACCTTTCATTATGGGCTCCATCTCCAATATTCAACCTTCTTCAAACTCTTCATCTTCTTCCTCAAATTCTTCCTCTTCTTCCGCCTCAGCTTCTGCAACTACGCCTCATCTTATTGACGCTTCTCTCGCAATCGCCACCAGATCTGAACCTCCGGTACTCGACTCCACCGCTGTAGCCAACAACAATAACAGTAATAGTCAGATTCAACAATTCTCTTCTTCATCCACAGCCGTCACGGTAGCCAATCCTCCCAAACGATCCACTAAGGACAGACACACGAAAGTCGATGGCCGGGGACGAAGAATTCGAATGCCGGCGACATGTGCAGCTAGAGTTTTTCAGTTGACCAGAGAATTAGGCCATAAATCCGACGGTGAAACAATTGAATGGCTTCTCCAGCAAGCGGAACCGGCTATTATTGCCGCCACCGGCACAGGAACAATCCCGGCTAATTTCTCAACACTCAATGTTTCACTTCGAAGCAGCGGCTCCACGCTGTCGGCGCCGCCGTCGAAATCAGCTCCTCATAGTTTTCACGGCGCGCTTGGACTGGCACACCATCCTTACGAAGAAGCTTCATACCAACACGCGCCTCTTCTAGGGTTTCATCCTCATCAACACCAACAACATCTCATGAACGCCGATCAAATCGGTGAAGCGCTTTCTAATGAGAATTACATGAGAAAACGCTATAGAGAAGATCTTTTCAAAGACGAAAACAACAACAACGAAAGCGGTGGTGATGGTTCTTCTTCTCCAAAAGCTTACAAAACAAATCACCAGCAAGATAGTATTGGTGATGGTGAAGGTGGAGGAGGAGGAGGGGGAGGAGGTGGAGTCTCTTCATCCTCTTCTCCCGGTAATTCTATTTCTGGACTTCTTAGACCGTCGAATATGTTACCGGCAACAGCCATGTGGGCCACCGCGGGTAGTGGAAGTACAATATGGATGGTACCAGTGAGTGGTGGTGGCGGTGGTGGAGGTGCTGCAACCACGAATTCAGAGACACAAACACAAAACATGTGGCCTTTTAGTCCTCATACTCAGTCTCAAAATCAAGCAAACGCTACTGCAACACCGTCTCAGTTACATTTCATGCCAAGGTTCAATCTTCCTCCCGGTGGTGGTGGTGGCGGTGTTGAATTCCAAGGTGGACGCGGTGGTTTACAACTGGGTTCAGTGTATCAGCCGTCACAGCATCTTGGATTAGCAGTGTCTGATTCAAACTTGGGTATGTTGGCTGCTCTTAATGCTTACACAAGAGCTGGTCATTTCAATGTTAACAACTCTTCCTCCGATCATCAACATCATCACCATCATTCAATGTCATTGGATTCTCATCCTCAACCTAATGATGAAAGCGGAGAAGATGCTCCTAATAATTCTCAATAA | 1557 | 0.4733 | MELSDLQNNKQKRGTTTFPHHQHQPQQQQESSPSNSHSQPQQQQLVVPFDGRPPPPFIMGSISNIQPSSNSSSSSSNSSSSSASASATTPHLIDASLAIATRSEPPVLDSTAVANNNNSNSQIQQFSSSSTAVTVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHGALGLAHHPYEEASYQHAPLLGFHPHQHQQHLMNADQIGEALSNENYMRKRYREDLFKDENNNNESGGDGSSSPKAYKTNHQQDSIGDGEGGGGGGGGGGVSSSSSPGNSISGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGGGGGGAATTNSETQTQNMWPFSPHTQSQNQANATATPSQLHFMPRFNLPPGGGGGGVEFQGGRGGLQLGSVYQPSQHLGLAVSDSNLGMLAALNAYTRAGHFNVNNSSSDHQHHHHHSMSLDSHPQPNDESGEDAPNNSQ* | 519 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g5070 | 518 | PANTHER | TRANSCRIPTION FACTOR TCP8 | 26 | 518 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 486 | 507 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 485 | 518 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Psa1g5070 | 518 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 26 | 518 | IPR005333 | GO:0003700 | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Psa1g5070 | 518 | ProSiteProfiles | TCP domain profile. | 143 | 197 | IPR017887 | - | |
Psa1g5070 | 518 | Pfam | TCP family transcription factor | 142 | 291 | IPR017887 | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 122 | 138 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 297 | 316 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 291 | 316 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 61 | 87 | - | - | |
Psa1g5070 | 518 | MobiDBLite | consensus disorder prediction | 122 | 151 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g5070 | Psa-Chr1 | 369909881 | 369915082 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g5070 | 140 | 464 | TCP Transcription Factor Family | AT1G35560 | 44.880 | 3.38e-63 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Psa1g5070 | TCP | 7.8e-39 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g5070 | - | - | qsu:111997570 | 432.18 |