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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Psa1g5070
ATGGAACTATCAGATTTGCAAAACAACAAACAGAAGAGAGGCACCACCACTTTTCCCCACCACCAACACCAACCACAACAGCAACAAGAATCTTCACCTTCCAATTCTCATTCTCAGCCGCAACAACAACAACTTGTGGTCCCTTTTGATGGAAGGCCACCACCACCTTTCATTATGGGCTCCATCTCCAATATTCAACCTTCTTCAAACTCTTCATCTTCTTCCTCAAATTCTTCCTCTTCTTCCGCCTCAGCTTCTGCAACTACGCCTCATCTTATTGACGCTTCTCTCGCAATCGCCACCAGATCTGAACCTCCGGTACTCGACTCCACCGCTGTAGCCAACAACAATAACAGTAATAGTCAGATTCAACAATTCTCTTCTTCATCCACAGCCGTCACGGTAGCCAATCCTCCCAAACGATCCACTAAGGACAGACACACGAAAGTCGATGGCCGGGGACGAAGAATTCGAATGCCGGCGACATGTGCAGCTAGAGTTTTTCAGTTGACCAGAGAATTAGGCCATAAATCCGACGGTGAAACAATTGAATGGCTTCTCCAGCAAGCGGAACCGGCTATTATTGCCGCCACCGGCACAGGAACAATCCCGGCTAATTTCTCAACACTCAATGTTTCACTTCGAAGCAGCGGCTCCACGCTGTCGGCGCCGCCGTCGAAATCAGCTCCTCATAGTTTTCACGGCGCGCTTGGACTGGCACACCATCCTTACGAAGAAGCTTCATACCAACACGCGCCTCTTCTAGGGTTTCATCCTCATCAACACCAACAACATCTCATGAACGCCGATCAAATCGGTGAAGCGCTTTCTAATGAGAATTACATGAGAAAACGCTATAGAGAAGATCTTTTCAAAGACGAAAACAACAACAACGAAAGCGGTGGTGATGGTTCTTCTTCTCCAAAAGCTTACAAAACAAATCACCAGCAAGATAGTATTGGTGATGGTGAAGGTGGAGGAGGAGGAGGGGGAGGAGGTGGAGTCTCTTCATCCTCTTCTCCCGGTAATTCTATTTCTGGACTTCTTAGACCGTCGAATATGTTACCGGCAACAGCCATGTGGGCCACCGCGGGTAGTGGAAGTACAATATGGATGGTACCAGTGAGTGGTGGTGGCGGTGGTGGAGGTGCTGCAACCACGAATTCAGAGACACAAACACAAAACATGTGGCCTTTTAGTCCTCATACTCAGTCTCAAAATCAAGCAAACGCTACTGCAACACCGTCTCAGTTACATTTCATGCCAAGGTTCAATCTTCCTCCCGGTGGTGGTGGTGGCGGTGTTGAATTCCAAGGTGGACGCGGTGGTTTACAACTGGGTTCAGTGTATCAGCCGTCACAGCATCTTGGATTAGCAGTGTCTGATTCAAACTTGGGTATGTTGGCTGCTCTTAATGCTTACACAAGAGCTGGTCATTTCAATGTTAACAACTCTTCCTCCGATCATCAACATCATCACCATCATTCAATGTCATTGGATTCTCATCCTCAACCTAATGATGAAAGCGGAGAAGATGCTCCTAATAATTCTCAATAA
1557
0.4733
MELSDLQNNKQKRGTTTFPHHQHQPQQQQESSPSNSHSQPQQQQLVVPFDGRPPPPFIMGSISNIQPSSNSSSSSSNSSSSSASASATTPHLIDASLAIATRSEPPVLDSTAVANNNNSNSQIQQFSSSSTAVTVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHGALGLAHHPYEEASYQHAPLLGFHPHQHQQHLMNADQIGEALSNENYMRKRYREDLFKDENNNNESGGDGSSSPKAYKTNHQQDSIGDGEGGGGGGGGGGVSSSSSPGNSISGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGGGGGGAATTNSETQTQNMWPFSPHTQSQNQANATATPSQLHFMPRFNLPPGGGGGGVEFQGGRGGLQLGSVYQPSQHLGLAVSDSNLGMLAALNAYTRAGHFNVNNSSSDHQHHHHHSMSLDSHPQPNDESGEDAPNNSQ*
519
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Psa1g5070
518
PANTHER
TRANSCRIPTION FACTOR TCP8
26
518
-
-
Psa1g5070
518
MobiDBLite
consensus disorder prediction
486
507
-
-
Psa1g5070
518
MobiDBLite
consensus disorder prediction
485
518
-
-
Psa1g5070
518
MobiDBLite
consensus disorder prediction
1
87
-
-
Psa1g5070
518
PANTHER
TRANSCRIPTION FACTOR TCP4-RELATED
26
518
IPR005333
GO:0003700
Psa1g5070
518
MobiDBLite
consensus disorder prediction
1
46
-
-
Psa1g5070
518
ProSiteProfiles
TCP domain profile.
143
197
IPR017887
-
Psa1g5070
518
Pfam
TCP family transcription factor
142
291
IPR017887
-
Psa1g5070
518
MobiDBLite
consensus disorder prediction
122
138
-
-
Psa1g5070
518
MobiDBLite
consensus disorder prediction
297
316
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Psa1g5070
Psa-Chr1
369909881
369915082
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Psa1g5070
140
464
TCP Transcription Factor Family
AT1G35560
44.880
3.38e-63
208
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
TCP
Psa1g5070
TCP
7.8e-39
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Psa1g5070
-
-
qsu:111997570
432.18
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Psa1g5070
1
369909881
369915082
Psa1g5070
1
369909881
369915082
ECH
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