Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g5012 ATGGAAGATACTGTTTCAGTCATTTCTGTGTGGTTTATTTGGTGGATCATTAGCTCAAAACTTCTACTTAGAAGCCTTGGCTTTAACTTCACCAACATTTGCATCAGCAATGGCCAACCTTATACCAGCTATAACCTTCATCATGGCGGTTTCCTTCGGTATGGAAAAATTAAATTTGAGAACAAAAGCTGGAAAGGCAAAGATAATAGGTACAATGACTGGAATAAGTGGAGCAATGGTATTAACATTTGTGAAAGGAATACCATTTTGGGTTCTCTATGTGCTTTGGCTAGTAGCAGCTCTTATGCATTATGGCTCATTATTCATGCAAAGATGAGTGAAAAATATCCAACACATTATTCAAGTACAGCATTGATGTCCTTTTGGGCTTCATTGCTTTCTATTGTGTTTGCTCTTTGTTTTGAGAGGGAGTTTAGTCAGTGGAAGTTGGGGTGGAATATTAGGTTACTAACTGTTGCTTATGCGGGTATAGTGGTTTCTGGAGCAATGATTTGTGTTATTTCTTGGTGTGTACACATGAGAGGACCATTGTTTGCATCTGTTTTTAGTCCTTTGATGCTTGTTTGTGTGGCCTTGGCTAGTTGTACATTGTTGAATGAGAACCTACACCTTGGAAGCATTATTGGAGCAGTGTTGATTGTATGTGGGTTATATGCTGTTGTATGGGGCAAAAGTAAAGAGATGAAGAAAAAGAATCAACTAGCTCCATCACAAAGCACTGATGAAATTGACCCAGTTGAAATTGTTGTGAAGCCTGTAGTAGAAGACAAAAGCAACCATAGTAACAACAATAGTCACAGTAGTAATTTACATGTTATTAGTGATAATGAAGATGAACATGTACAAAATCAAGAAAAAGGAGGGGTGTAG 891 0.3771 MEDTVSVISVWFIWWIISSKLLLRSLGFNFTNICISNGQPYTSYNLHHGGFLRYGKIKFENKSWKGKDNRYNDWNKWSNGINICERNTILGSLCALASSSSYALWLIIHAKMSEKYPTHYSSTALMSFWASLLSIVFALCFEREFSQWKLGWNIRLLTVAYAGIVVSGAMICVISWCVHMRGPLFASVFSPLMLVCVALASCTLLNENLHLGSIIGAVLIVCGLYAVVWGKSKEMKKKNQLAPSQSTDEIDPVEIVVKPVVEDKSNHSNNNSHSSNLHVISDNEDEHVQNQEKGGV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g5012 296 MobiDBLite consensus disorder prediction 262 296 - -
Psa1g5012 296 MobiDBLite consensus disorder prediction 279 296 - -
Psa1g5012 296 Pfam EamA-like transporter family 90 228 IPR000620 GO:0016020|GO:0016021
Psa1g5012 296 MobiDBLite consensus disorder prediction 263 278 - -
Psa1g5012 296 SUPERFAMILY Multidrug resistance efflux transporter EmrE 130 233 - -
Psa1g5012 296 PANTHER WAT1-RELATED PROTEIN 82 265 IPR030184 GO:0016021|GO:0022857
Psa1g5012 296 PANTHER WAT1-RELATED PROTEIN 82 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g5012 Psa-Chr1 367790402 367793440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g5012 88 236 Nodulin-like Gene Family AT1G68170 48.993 2.26e-45 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g5012 1 367790402 367793440 Psa7g2204 7 157758679 157762019 PCT