Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g5006 ATGGCTGAAATTCAACACCATGCAACTTCATTACCTCGTAGTGAATCAAAAGTATACAACATGGATGTTGAAAAGAATGGACAAGAAGAACAAACTGATGAAAAAGATTATACTCAAAGAGCACAATGGCTTAGAGCAGCTGTATTAGGTGCTAATGATGGTTTACTCTCAACAGCCTCCTTAATGATGGGTATTGGAGCTGTTAACAAAGATGTTAAGACAATGATTCTAACAGGAATTGTTGGTCTTGTTGCTGGTGCATGCAGCATGGCAATTGGTGAATTTGTTTCTGTTTATTCACAATATGATATTGAGTTTTCTCAAATGAAAAGACAAGGAAACACTTCTCAGAAAGATAAATTACCTAACCCTTATTACGCTGCTTTCGCTTCCGCCGTCGCGTTTGCGGTCGGCGCGTTGGTGCCGCTGCTCGGCGCGGCCTTTGTGAAAGACTATAAGGTTAGGTTGGGAGTTGTGGTTGGTGTTGTGAGTGTTGCTTTGTTTGGTTTTGGATTGTTGAGTGGTTTTCTTGGGAAAGCACCTTTGGTTAAGTCTTCTTTTAGGGTTTTGATTGGTGGATGGCTTGCTATGTCTCTTACTTTTGGTTTAACTAAGCTTGTAAACCATGTTGGAGTTTGA 639 0.4053 MAEIQHHATSLPRSESKVYNMDVEKNGQEEQTDEKDYTQRAQWLRAAVLGANDGLLSTASLMMGIGAVNKDVKTMILTGIVGLVAGACSMAIGEFVSVYSQYDIEFSQMKRQGNTSQKDKLPNPYYAAFASAVAFAVGALVPLLGAAFVKDYKVRLGVVVGVVSVALFGFGLLSGFLGKAPLVKSSFRVLIGGWLAMSLTFGLTKLVNHVGV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g5006 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 209 IPR008217 GO:0005384|GO:0030026
Psa1g5006 212 Pfam VIT family 112 204 IPR008217 GO:0005384|GO:0030026
Psa1g5006 212 Pfam VIT family 44 117 IPR008217 GO:0005384|GO:0030026
Psa1g5006 212 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g5006 Psa-Chr1 367668974 367670348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g5006 13 212 Nodulin-like Gene Family AT3G43660 65.672 3.13e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g5006 K22736 - gmx:100811713 259.225