Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g5004 ATGAGAGATATAGGAAAATTAGTGCATGGATTGAAACCAGCTTTGATGATGTTAATGGTTCAAATTGCATTTGCTTCTGTCAATGTTCTTTACAAACTTGCAATTAACAATGGAATGAGTGTTAGGGTTCTTACTGCTTATCGTCTCATTTTTGCAGCAGCTACTACTATTCCACTTGCTCTTGTTTTTGAAAGGAATAACAGACCAAAGCTTACATGGAGGGTTGTTTTTATGTCATTCTTTTGTGGTTTATTTGGAGGAAGTTTATTTCAAAACCTATATTTCGAGTCATTGGCATTGATATCGGCAACATTTGCTTCCGCGGTTTATAATCTCATTCCGGCCGTCACTTTTATCTTGGCAGTCTCTTTCGGTTATGAAAGATTGAATTTCCAAAGAGCAGCAGGAAAGGCTAAGGTGTTAGGAACAATAACAGGAATTGGAGGGGCAATGATGTTAACATTTCTCAAAGGTGTTGAAATTAACATTTGGACATTTCACATTAATCTCTTGCATAAGGGAAAAAATGGAACAATAAATGATGACTCTGGTAGTAAATTGTTGGGTATCTTTTTTGGTCTTGGAAGTTGCTTCTGTTTTGCATTATGGCTCATCATTCAGGCTAAAATGAGCAAAGAATATCAAGGGCACTATTCAAGTTCAGCATTGATGAACTTAATGGGGGCAACTCAAGCTACAATTTTTGCTCTTTGTATGGAGAAAGATTGGAGCCAATGGAGATTAGGTTGGAGTATTAGGCTTCTAACTGCAGCATATTCAGGAGTTGTAGCCTCTGGATTAATGATTGTTGTGATTGCATGGTGTGTAGGGATGAGAGGTCCACTATACGCCTCAGTTTTTAACCCTTTGATGTTAGTGCTAGTGGCCATTGCTGGTTCTTTGATGTTGGATGAGAATTTATATTTGGGAAGTGTAATTGGAGCAGTGTTGATAATGGTTGGATTATACATGGTGTTATGGGGCAAGAGCAAAGAAATGAAAAAAGTGACTCATTTAGAAATCACTTCTGAAACCGAAGAAATCGAGATTGTTGTCTCGTGGAACACCCAAGATCGCAATGACATTAATCGCAACGACAACCTCGACAACAATAGCAAGATTAAGAGCAAAATTGAAGGACAAGAAACTGAAAATAATGGAAAAGAAGAATTGGTTTCAAGTCTTCAAGTGAAGTCTTGA 1200 0.375 MRDIGKLVHGLKPALMMLMVQIAFASVNVLYKLAINNGMSVRVLTAYRLIFAAATTIPLALVFERNNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVSFGYERLNFQRAAGKAKVLGTITGIGGAMMLTFLKGVEINIWTFHINLLHKGKNGTINDDSGSKLLGIFFGLGSCFCFALWLIIQAKMSKEYQGHYSSSALMNLMGATQATIFALCMEKDWSQWRLGWSIRLLTAAYSGVVASGLMIVVIAWCVGMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIMVGLYMVLWGKSKEMKKVTHLEITSETEEIEIVVSWNTQDRNDINRNDNLDNNSKIKSKIEGQETENNGKEELVSSLQVKS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g5004 399 PANTHER WAT1-RELATED PROTEIN 12 354 - -
Psa1g5004 399 MobiDBLite consensus disorder prediction 373 399 - -
Psa1g5004 399 PANTHER WAT1-RELATED PROTEIN 12 354 IPR030184 GO:0016021|GO:0022857
Psa1g5004 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Psa1g5004 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
Psa1g5004 399 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Psa1g5004 399 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g5004 Psa-Chr1 367551109 367553489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g5004 11 365 Nodulin-like Gene Family AT1G25270 39.276 1.29e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g5004 - - gmx:100809587 488.419