Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4999 ATGCCAGACGTCAGTGATTCAATTGAGCAACTCAAAACCAAGTTTATGAACAAGGGTCTCACAGATAAAGACCTTGTCCTTCTCAGTGCTGCACATACAATAGGAACCACAGCATGTTTCTTCATGACAAAAAGGCTATACAACTTTTCTACATCTGGTGGTGGATCAGACCCAGCTATTAGTCCAAATTTCCTCCCAGAACTTCAGGAAAAGTGCCCTCAGACGGGACACGAGAACGACCGTTTAGCCATGGACATAACGACTGAAACAAAATTCGACAAGAACATATTGAGAAACATAAGGGAAGGTTTTGCTGTGTTAGAATCTGATGCAAGACTTAACGATGATGCAAGAACAAAGGCTGTGATTGAATCATACTTAGGTCCCTTCACTCCAATATTTGGACCTTCCTTCGAATATGATTTTGTTCAGTCAATTGTTAAAATGGGACAAATTGGTGTCAAGACAGGTTCTGATGGAAACATTAGGCAAGTCTGCTTGAAACTCCATTGA 513 0.4094 MPDVSDSIEQLKTKFMNKGLTDKDLVLLSAAHTIGTTACFFMTKRLYNFSTSGGGSDPAISPNFLPELQEKCPQTGHENDRLAMDITTETKFDKNILRNIREGFAVLESDARLNDDARTKAVIESYLGPFTPIFGPSFEYDFVQSIVKMGQIGVKTGSDGNIRQVCLKLH* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4999 170 Gene3D Peroxidase, domain 2 2 149 - -
Psa1g4999 170 PANTHER PEROXIDASE 25-RELATED 1 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 SUPERFAMILY Heme-dependent peroxidases 2 167 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 PRINTS Plant peroxidase signature 23 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 PRINTS Plant peroxidase signature 83 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 PRINTS Plant peroxidase signature 99 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 PRINTS Plant peroxidase signature 144 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 PANTHER PEROXIDASE 1 166 - -
Psa1g4999 170 Pfam Peroxidase 2 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 ProSiteProfiles Plant heme peroxidase family profile. 1 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g4999 170 ProSitePatterns Peroxidases proximal heme-ligand signature. 24 34 IPR019793 -
Psa1g4999 170 Gene3D - 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4999 Psa-Chr1 367287998 367288888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4999 1 170 Peroxidase AT2G41480 45.882 1.95e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4999 K00430 - gmx:547549 251.521