Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4977 ATGGCTGGTTGTAAAACTACCGTATCAAACATAGTCATGTCCATCGTGTTGTTGTTAACTCTGTTGGTGATTACGCCGCTGTTCAAGTACACTCCGAATGCAGTGCTTGCATCAATTATCATAGCTGCTGTGATGAGCCTTGTCGATATTAAAGCAGCTGTTCTTCTATGGAAAGTTGACAAATTCGACTTTCTAGCTTGCATGGGAGCCTTCTTCGGTGTCATCTTCCAAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATATCTTTTGCCAAAATTCTCTTACAGGTGACGAGGCCAAAGACCGCGGTGCTCGGGAAGCTTCCGGGGACAAGTGTTTATCGGAACGTCCTGCAATATCCCAAAGCAGCTCAGGTTCCCGGCATGCTCATCGTCAGGGTTGATTCTGCAATCTACTTCTCAAATTCCAACTACATTAAAGACAGAATATTGAAGTGGCTGGCGGATGAAGAGATTCAAAGAACATCGAGTGAATTTCCTAGTATACAATATCTCGTTGTTGAAATGTCGCCTGTTACTGATATTGATACTAGTGGAATTCATGCCTTTGAAGATTTAATCAAGAGCCTCAAGAAAAGAGATATTCAGCTTCTATTGGCGAACCCGGGACCAATTGTAATTGAGAAGCTTCATGCATCGAAGTTATCAGGCTTAATTGGAGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAAGGTGCAGATTTATGA 753 0.4236 MAGCKTTVSNIVMSIVLLLTLLVITPLFKYTPNAVLASIIIAAVMSLVDIKAAVLLWKVDKFDFLACMGAFFGVIFQSVEIGLLIAVAISFAKILLQVTRPKTAVLGKLPGTSVYRNVLQYPKAAQVPGMLIVRVDSAIYFSNSNYIKDRILKWLADEEIQRTSSEFPSIQYLVVEMSPVTDIDTSGIHAFEDLIKSLKKRDIQLLLANPGPIVIEKLHASKLSGLIGEDKIFLTVGDAVATFGPKGADL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4977 250 Gene3D STAS domain 100 244 IPR036513 -
Psa1g4977 250 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 1 250 - -
Psa1g4977 250 Pfam Sulfate permease family 2 68 IPR011547 GO:0016021
Psa1g4977 250 CDD STAS_SulP_like_sulfate_transporter 121 236 - -
Psa1g4977 250 SUPERFAMILY SpoIIaa-like 122 244 IPR036513 -
Psa1g4977 250 Pfam STAS domain 121 239 IPR002645 -
Psa1g4977 250 ProSiteProfiles STAS domain profile. 120 243 IPR002645 -
Psa1g4977 250 PANTHER SULFATE TRANSPORTER 1 250 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4977 Psa-Chr1 366687269 366688878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4977 1 241 Inorganic Solute Cotransporters AT4G08620 69.710 7.28e-114 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4977 K17470 - gmx:100784124 388.652