Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4976 TGGAATTGGGAGACAATAGTAATTGGAGTATCATTCTTGGCTTTCCTTCTTACAACAAAATATATTGCTAAGAAGAAAAAGAATCTCTTTTGGGTGGCTGCAATTTCTCCTATGATATGTGTTATTGTCTCTACTTTTTCTGTTTACATTACAAGGGCTGACAAGAAAGGAGTAGCAGTTGTGAAACATATAAGAAGGGGTGTGAATCCATCTTCTGTGAATGAGATATATTTCAGTGGAAACTATTTAAGTGCTGGTATTAGGATTGGTGTGATATCTGGCATGGTAGCGCTCACGGAAGCTGTGGCTATCGGAAGAACATTTGCTGCTATGAAAGACTATTCGATAGATGGTAATAGAGAAATGGTGGCATTGGGAACAATGAACGTTATCGGTTCAATGACATCTTGTTATGTGGCTACAGGATCGTTTTCGCGGTCGGCTGTGAACTATATGGCTGGTTGTAAAACTACCGTATCAAACATAGTCATGTCCATCGTGTTGTTGTTAACTCTGTTGGTGATTACGCCGCTGTTCAAGTACACTCGAATGCGTGCTTGCGTCAATTATCAAGAGCTGGCTGTGATGAGGCCTTGT 597 0.4054 WNWETIVIGVSFLAFLLTTKYIAKKKKNLFWVAAISPMICVIVSTFSVYITRADKKGVAVVKHIRRGVNPSSVNEIYFSGNYLSAGIRIGVISGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTTVSNIVMSIVLLLTLLVITPLFKYTRMRACVNYQELAVMRPC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4976 199 Pfam Sulfate permease family 1 182 IPR011547 GO:0016021
Psa1g4976 199 PANTHER SULFATE TRANSPORTER 1 183 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa1g4976 199 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4976 Psa-Chr1 366685676 366686628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4976 1 182 Inorganic Solute Cotransporters AT4G08620 73.077 6.37e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4976 K17470 - gmx:100806204 301.597