Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4975 ATGAGTGAGGTTCTTAATGATGGAGCTGTGGCAATGACAATGGAGGAAATAAAAAGCAATCATGATAATACTCTTCCACAACATATTCACAAAGTTTCAACTCCTCCTAAGCAATCACTTTTCCAAGATATCAAACATAATTTCAATGAAACTTTCTTCTCAGATGACCCTTTTGGCAAGTTTAAGAACCAAACGGTATCAAGAAGGTTTGTTCTTGGACTCCAAACTGTTTTCCCGATTTTCGAGTGGGGAAGAGACTACAATCTTAAGAGTTTCAAGGGTGATTTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATTGCATATGCAAATCTTGCAAATTTGGAACCACATTATGGACTATATACAAGTTTTGTTGCTCCTCTTGTGTATGCTTTTATGGGAAGTTCAAGAGATATTGCAATAGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGCACCTTGCTAACTGATGAAATCCCAAACTTCAAAAGTCATGAATATCTTCGTCTTGTATTTACCGCGACTTTCTTTGCAGGAATTACTCAAATGGCACTTGGACTTTTAAGGCTCGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAGCTTAAAGGTCTTCTTGGCATAAAACAATTCACTAAGAAAACTGATATTGTATCTGTCATGAGATCGGTTTTCACTGCAGCCCACCACGGC 756 0.3942 MSEVLNDGAVAMTMEEIKSNHDNTLPQHIHKVSTPPKQSLFQDIKHNFNETFFSDDPFGKFKNQTVSRRFVLGLQTVFPIFEWGRDYNLKSFKGDLIAGLTIASLCIPQDIAYANLANLEPHYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLTDEIPNFKSHEYLRLVFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKQFTKKTDIVSVMRSVFTAAHHG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4975 252 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Psa1g4975 252 PANTHER SULFATE TRANSPORTER 19 251 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa1g4975 252 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 251 - -
Psa1g4975 252 Pfam Sulfate permease family 92 251 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4975 Psa-Chr1 366678293 366679328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4975 6 252 Inorganic Solute Cotransporters AT1G22150 67.742 1.58e-116 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4975 K17470 - gmx:100784124 384.8