Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4973 ATGAGTCAAGTTTTTAGTGATGGAGTTGTGGCAAGAGCCACTGAGGAAATAAATAGCAATCCTCCTTCACGTAGACATGCTGAAAACATTCTTCCACATAGGCACAAAGTTGCATCTCCTCCAAGGCAAACACTTTTCCAAGAGTTCAAGCAGAATTTCAATGAAACATTCTTCTCAGATGACCCTTTTGGCAAGTTTAAGAATCAAAAAGGATCAAGAAAGTTTATTCTTGGACTCGAGTCTATTTTCCCGATTTTCGAATGGGGAAGAGGATACAATTTTAAGAGTTTCAAGGGTGATTTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGAACCACAGTATGCACTATATACAAGTTTTGTTGCTCCACTTGTGTATGCTTTTATGGGAAGTTCAAGGGATATTGCAATAGGACCAGTAGCTGTTGTGTCTCTCTTGCTTGGCACCTTGCTAACTGATGAAATCCCAAACTTCAAAAGTCATGAATATCTTCGTCTGGCATTTACTGCAACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGACTTTTAAGGCTCGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATTGTGGGATTCATGGCGGGAGCGGCCGTTACTATTGCACTCCAGCAACTTAAAGGTTTTCTTGGCATAAAAAATTTCACTAAGAAAACTGATATTATTTCTGTCATGAGATCGGTTTTTAGTGCCGCCCACCACGGCTGGAATTGGGAGACAATATTAATTGGAGTATCATTCTTGGCTTTCCTTCTTACAACAAAATATATTGCTAAGAAGAAAAAGAATCTCTTTTGGGTGGCTGCAATTTCTCCTATGATATGTGTTATTGTCTCTACTTTTTCTGTTTACATTACAAGGGCTGACAAGAAAGGAGTAGCAATTGTGAAACATATTGAAGATGGTGTGAATCCAATATCAGTCGATGAAATATTTTTCAGTGGAAAATATCTTAGTGCTGGTATTAGGATTGGTCTGATTTCTGGTATGGTCGCACTGACGGAAGCTGTGGCAATTGGAAGAACATTTGCAGCTATGAAAGACTATTCATTGGACGGTAATAGAGAAATGGTGGCGCTAGGAACAATGAATGTTATTGGTTCAATGACATCTTGTTATGTAGCTACAGGATCGTTTTCGCGGTCGGCTGTGAACTATATGGCTGGTTGTAAAACTACCGTATCAAACATAGTCATGTCCATCGTGTTGTTGTTAACTCTGTTGGTGATTACGCCGCTGTTCAAGTACACTCCGAATGCAGTGCTTGCATCAATTATCATAGCTGCTGTGATGAGCCTTGTCGATATTAAAGCAGCTGTTCTTCTATGGAAAGTTGACAAATTCGACTTTCTAGCTTGCATGGGAGCCTTCTTCGGTGTCATCTTCCAAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATATCTTTTGCCAAAATTCTCTTACAGGTGACGAGGCCAAAGACCGCGGTGCTCGGGAAGCTTCCGGGGACAAGTGTTTATCGGAACGTCCTGCAATATCCCAAAGCAGCTCAGGTTCCCGGCATGCTCATCGTCAGGGTTGATTCTGCAATCTACTTCTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGGCTCAAAGGACAGCAAGTGAATTTGCCAGTATACAGTATCTCATCGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATTCATGCCTTAGAAGATTTACTCAAGAGCCTCAAGAAAAAAGATGTGCAGCTTCTTGTGGCGAATCCGGGACCGATTGTAATTGAGAAGCTCCATGCATCAGAGTTATCAGGTGTAATTGGGGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGTAGATTCTTGA 1977 0.4117 MSQVFSDGVVARATEEINSNPPSRRHAENILPHRHKVASPPRQTLFQEFKQNFNETFFSDDPFGKFKNQKGSRKFILGLESIFPIFEWGRGYNFKSFKGDLIAGLTIASLCIPQDIAYAKLANLEPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLTDEIPNFKSHEYLRLAFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMAGAAVTIALQQLKGFLGIKNFTKKTDIISVMRSVFSAAHHGWNWETILIGVSFLAFLLTTKYIAKKKKNLFWVAAISPMICVIVSTFSVYITRADKKGVAIVKHIEDGVNPISVDEIFFSGKYLSAGIRIGLISGMVALTEAVAIGRTFAAMKDYSLDGNREMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTTVSNIVMSIVLLLTLLVITPLFKYTPNAVLASIIIAAVMSLVDIKAAVLLWKVDKFDFLACMGAFFGVIFQSVEIGLLIAVAISFAKILLQVTRPKTAVLGKLPGTSVYRNVLQYPKAAQVPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEAQRTASEFASIQYLIVEMSPVTDIDTSGIHALEDLLKSLKKKDVQLLVANPGPIVIEKLHASELSGVIGEDKIFLTVGDAVATFGPKGVDS* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4973 658 TIGRFAM sulP: sulfate permease 84 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa1g4973 658 Gene3D STAS domain 508 652 IPR036513 -
Psa1g4973 658 SUPERFAMILY SpoIIaa-like 530 652 IPR036513 -
Psa1g4973 658 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Psa1g4973 658 Pfam Sulfate permease family 97 476 IPR011547 GO:0016021
Psa1g4973 658 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
Psa1g4973 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 657 - -
Psa1g4973 658 Pfam STAS domain 529 647 IPR002645 -
Psa1g4973 658 PANTHER SULFATE TRANSPORTER 18 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4973 Psa-Chr1 366647972 366652036 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4973 23 658 Inorganic Solute Cotransporters AT1G22150 71.429 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4973 K17470 - gmx:100784124 1031.94