Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4955 ATGGCGGAGGAAAGTGGAGAAATCAATGGCGGTTTCTCGATGGACTCAACCGAATCACGCTGGGTTTTCCAGGAAGATGACGAAGACGAAGATGTTTCTGATATAGAAGAATACGACGCCGATTTGAGATTGAGAGGACGCACTACTGTAGTGGATTCCGAAGATGAGGATAACCTTGAACAAAAACTCATACGCACTGGTCCTCGAATCGATTCGTTCGACGTTGAGGCTCTTGATGTTCCTGGTGCTCCTAGAAATGATTATGAGGACATAAGTGTAGGAAAAAAAATTGCGTTGGCTTTTCAGACTCTTGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATATACATTCAGTGTTATGTTTAGAAAGGCCCCTATAAATGAAAATGAAGACATTCTTGGAGCATTATCACTTGTCTTGTATACTTTAATCTTGATTCCCTTGCTGAAATATGTCCTGGTTGTTCTGTGGGCCAATGATAATGGAGAAGGTGGTACTTTTGCATTATACTCCTTGATTTGTCGTCATGCTAAGGTGAGTCTTCTCCCCAATCAGTTGGCATCAGATGCCCGTATATCAAGCTTTAGGCTAAAGGTGCCATCCCCTGAGCTCGAAAGGTCATTAAAAATCAAGGATAGACTTGAGGGTTCTCTAACTCTAAAGAAGACTCTGCTGATATTAGTGCTTGCTGGTACATCCATGGTGATTGCTAATGGTGTTGTAACACCAGCAATGTCAGTATTGTCATCTGTTGGTGGTTTAAAAGTTGGGATAGATGCAATCGAGCAAGATGAAGTGGTGATGATTTCAGTTGCTTGCCTGATTGTTTTGTTCAGTGTACAAAAGTTTGGAACGAGTAAAGTGGGACTTGCAGTTGGACCCGCTTTGTTCATATGGTTTTGTTCTCTTGCGGGTATTGGGATATACAATCTTGTCAAATATGACAGAAGTGTCTTGAGGGCATTTAATCCTATTTATATCTACTATTTCTTCAAGAGGAACACAACTAAGGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGTTCTGAAGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACGATCAGTGCAGCTTACATTTATCTTTCTTGTTTTGCCGTGCCTGCTACTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAGGCCTTTTATTCTTCTGTTCCGAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTACCATTGCGGCACTTATTGCAAGCCGGGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGCTTCCCTCGTCTTAAAATCATTCACACCTCCAGGAAATTTATGGGGCAGATCTATATCCCTGTCCTAAACTGGTTTCTCCTGGCTGCTTCGCTGGTGCTTGTCTGCTCTATATCCAGCATTGATGAGATTGGAAATGCCTATGGAATTGCTGAGCTGGGCGTGATGATGACAACCACTGTTTTACTAACCGTTGTTATGCTTCTTATATGGCAAATACACATTATCATAGTGTTGTGTTTTGCAGTAGTCTTCTTGGGATTGGAGTTGACTTTCTTTTCATCTGTTCTGTTGAATGTGGCAGATGGAAGTTGGATAATTTTGGTCTTTTCTGTAATAATGTTTCTGATAATGTATATATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATACGAGAATTAGGGTCTAATCTTGGGACAATACGTGCTCCTGGAATTGGTTTGCTTTATAATGAGTTGGTCAAAGGAATACCAGCAATTCTTGGACATTTTCTGACTACACTTCCAGCAATTCACTCCATGATCATATTTGTGAGTATCAAGTATGTTCCGGTTCCTGTGGTACCTCAAAGTGAAAGGTTCCTTTTCCGGCGAGTTTGCCTCAAAAGTTATCATATATTTCGTTGTATTGCCAGATATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAGATGCTGATTGAGAGCCTAGAGAAGTTTATACGCCGTGAGGCTCAGGAGAGATCACTAGAAAGTGATAGGGATGAAGATGATTCAGAGGATGAGTACTCTAGCTCTAGAGTTCTAATTGCTCCAAATGGTAGTGTTTACTCACTTGGGATTCCTCTTCTTTCTGGTTTTAAGGATACAAACACCTCTGTTTTAGAAGCAAGCACATCAGAGGTTTTAAGCAGCACAACCTCCGAGTCGTCGGTGTTTGATGCCGAGCAGAGTCTTGAGAGGGAGCTATCTTTTATTCGCAAAGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGAGCAAGGAAGGACTCTTGGTTTATCAAGAAGCTAGTAATAAACTATTTCTACGCCTTCTTAAGAAAGAACTGCAGGAGGGGGATTACAACTTTAAGTGTGCCCCATTCACATCTGATGCAAGTTAGCATGACTTACATGGTTTGA 2535 0.4118 MAEESGEINGGFSMDSTESRWVFQEDDEDEDVSDIEEYDADLRLRGRTTVVDSEDEDNLEQKLIRTGPRIDSFDVEALDVPGAPRNDYEDISVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFRKAPINENEDILGALSLVLYTLILIPLLKYVLVVLWANDNGEGGTFALYSLICRHAKVSLLPNQLASDARISSFRLKVPSPELERSLKIKDRLEGSLTLKKTLLILVLAGTSMVIANGVVTPAMSVLSSVGGLKVGIDAIEQDEVVMISVACLIVLFSVQKFGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDRSVLRAFNPIYIYYFFKRNTTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFIFLVLPCLLLGYLGQAAYLMENHADAGQAFYSSVPSGAFWPTFLIATIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAASLVLVCSISSIDEIGNAYGIAELGVMMTTTVLLTVVMLLIWQIHIIIVLCFAVVFLGLELTFFSSVLLNVADGSWIILVFSVIMFLIMYIWNYGSNLKYETEVKQKLSMDLIRELGSNLGTIRAPGIGLLYNELVKGIPAILGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCLKSYHIFRCIARYGYKDVRKENHQTFEQMLIESLEKFIRREAQERSLESDRDEDDSEDEYSSSRVLIAPNGSVYSLGIPLLSGFKDTNTSVLEASTSEVLSSTTSESSVFDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4955 844 TIGRFAM kup: potassium uptake protein 99 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g4955 844 Pfam K+ potassium transporter 100 673 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g4955 844 MobiDBLite consensus disorder prediction 1 34 - -
Psa1g4955 844 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
Psa1g4955 844 PANTHER POTASSIUM TRANSPORTER 16 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4955 Psa-Chr1 365604774 365612501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4955 3 844 Inorganic Solute Cotransporters AT5G09400 77.465 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4955 - - gmx:100788190 1379