Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4952 ATGGATAGTCTTTGTTGCTTCAACTCTGCCAGAAAGGCTGTTGGATCATGTAGCTCTGGCAAAGGCAAGAGCAATCAGTACCCTCTTAAGTATGGCTTTTGCTTAGTTGAAGGGAAACCCGATCACCCAATGGAGGACTTTCATGTAGCGAAAATCGTACAGTTCCATGGGCGAGAGTTAGGACTTTTCGCCATATTTGACGGACACTCGGGAGACACCGTGCCTGCCTATTTACAAAAACATCTCTTTGCTAATATCTTGAAGGAAGAAGACTTCTGGACTGATCCGAACAGTTCGATCATCGAAGCTTACGAGTCAACGGATCAGGCCATTCTTTCTCACAGTCCTGACTTGGGCCGAGGAGGATCGACTGCAGTGACTGCCATTCTTATAAACAATCAGAAGTTATGGATAGCAAACGTTGGAGATTCGCGAGCTGTTCTGTCGAGGAAAGGGTCCGCCATACAGATGAGTATCGATCATGAGCCCAATACTGAAAGACGCATCATCGAGAATAAAGGCGGCTTTGTCTCAAACCTTCCAGGAGATGTTGCAAGAGTGAATGGACAGCTCGCAGTTTCTCGAGCATTCGGAGACAGAAACCTGAAGTCACACTTGCGGTCTGATCCAGACGTACAACCCGACGATATCGATCAAGATACTGAGCTCTTGATACTTGCTAGTGACGGTCTATGGAAGGTAATGGCGAATCAAGAAGCAGTTGATATTGCAATAAAGATAAAAGATCCAGAAAAAGCAGCAAAACAACTAACTGCAGAGGCATTGAAAAGAGAGAGTAGGGATGATATTTCATGCATTGTAGTTCGTTTCAAGTGA 837 0.4516 MDSLCCFNSARKAVGSCSSGKGKSNQYPLKYGFCLVEGKPDHPMEDFHVAKIVQFHGRELGLFAIFDGHSGDTVPAYLQKHLFANILKEEDFWTDPNSSIIEAYESTDQAILSHSPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRKGSAIQMSIDHEPNTERRIIENKGGFVSNLPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQPDDIDQDTELLILASDGLWKVMANQEAVDIAIKIKDPEKAAKQLTAEALKRESRDDISCIVVRFK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4952 278 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 277 - -
Psa1g4952 278 SMART PP2C_4 22 275 IPR001932 -
Psa1g4952 278 Gene3D - 12 278 IPR036457 -
Psa1g4952 278 Pfam Protein phosphatase 2C 42 270 IPR001932 -
Psa1g4952 278 CDD PP2Cc 31 277 IPR001932 -
Psa1g4952 278 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
Psa1g4952 278 SMART PP2C_SIG_2 41 277 IPR001932 -
Psa1g4952 278 PANTHER PROTEIN PHOSPHATASE 2C 1 277 IPR015655 GO:0004722|GO:0006470
Psa1g4952 278 SUPERFAMILY PP2C-like 25 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4952 Psa-Chr1 365551739 365554719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4952 1 278 PP2C-type Phosphatase Gene Family AT1G22280 66.202 7.84e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4952 K17506 - jre:109003252 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2277 7 162124680 162127696 Psa1g4952 1 365551739 365554719 PCT