Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4927 ATGGATGGAACCAATAGAGGTGAAGCGGAACGGTGGCTCTACACAGCCAACAAGCTTCTTAGCGCGCGTGACTTACACGGCGCACGCTCATTCGCTATCCGGGCACGTGAATCCGACCCGAGATTTGAAGCTACCGAGCTTCTCCTAGCGGTTATTGATACTCTCTTAGCGGGTGAAGTTCAGATCAAAGAACATCTTGATTACTACGCCATTCTTCAAATTCTTCGTTACACTCAGAACATTGAGTACATCGCCGTTCAGTACCGCCGTCTCGCCGTTCTGCTCGACCCTCACCGGAATCCGTTCGCTTTTGCCGCTCATGCTTTTTCTCTTGTTCATGACGCCTGGTCCATTTTCTCAAATCCACATAAGAAAGGTTTATATGATGAACAGCTTCATTTTCTTACTCAACCACCACCGCCGCAACCACCACCGCAACCTATTCAACCGCCACTGCCTCCACCGCAACCTATTCAACCACCACAGCCACCACCACAGCCGAAGCCGCAACCACAACCTATTCAAACTCCTCCTCCAGTTCAGGTCAATCAGAATCACGGCCTTCAACAGAGGAACACCCCTAGGTCTTCCAATCAAGCTAACGTAATTACCGAGGGACAAAACAATGGGCCGAGGCAGAGTCGGCGGAATATCGACGACCGGACTGGACCGAGTCAGAGCAATGTCGACGAGCAAACTGAGCCTAAGCCTGCTGACACTGAAGCTGGAAGCTTTTGGACGGCGTGCCCTTACTGTTATGCAATGTTTGAGTATCCTAATGTTTATCAGGAGTGTACACTCCGGTGTCAGAATTGTAGGAAAGGGTTTCATGCGGTGGTGGTACGGTCACCACCGGAGTTGAGTGAAAATGGTAGTTTGTTCTGTAGCTTTGGGTATATCCCTTTAGGGTTTAGTGGAAATTTTAAGGATATTAGTGGGTCATCTTCGGAATGGAACCCTATTTCTACTTTGTTTCCTTGCTCTATGAAAGGCGCTTCTTCCAAGAAGGGGGATGATAGCAATGAGAGGAAGAAGGTGGTTATGACGAGGAGGAGTATGAAAAGAAGAAGGACTGTTGGGGGTGGTGATGGTGATGATGCTGGAAAGGGGCCTCTTGATACTGGGAGGCCCAAGAGGGGGGTTCAGAATGGTAATGCTGGCGGCGGCGGTGGTGGTGACAATGTGCATGATGGTGAGGCTGTTGATCCTGCCTCTGCACCCGCGAAGCTGTCCAATGTTGAAGCTAGTAAGAAAGCTGTGTTGGGTGGATCGAGGAGGAGGGGTGCGGCCAATTTAGGTAAATTGGATCTGAATGTAGAGTTTAGCAATGAGGTGGAAGAAGCTGCTGCTGGCGGAGCGAAAGAACGGAATGTGAATGGGACTGGAAATCCTGAGGATAATATTGAAGGAATTGGGTTTTTTGAAGGGCTCGATGAGTTCCTTAGTAGCTTACCAATTCTAAATGTTGTTGCCGATGATAAGATGATAAGGTTACCAGGTCATTAG 1506 0.4907 MDGTNRGEAERWLYTANKLLSARDLHGARSFAIRARESDPRFEATELLLAVIDTLLAGEVQIKEHLDYYAILQILRYTQNIEYIAVQYRRLAVLLDPHRNPFAFAAHAFSLVHDAWSIFSNPHKKGLYDEQLHFLTQPPPPQPPPQPIQPPLPPPQPIQPPQPPPQPKPQPQPIQTPPPVQVNQNHGLQQRNTPRSSNQANVITEGQNNGPRQSRRNIDDRTGPSQSNVDEQTEPKPADTEAGSFWTACPYCYAMFEYPNVYQECTLRCQNCRKGFHAVVVRSPPELSENGSLFCSFGYIPLGFSGNFKDISGSSSEWNPISTLFPCSMKGASSKKGDDSNERKKVVMTRRSMKRRRTVGGGDGDDAGKGPLDTGRPKRGVQNGNAGGGGGGDNVHDGEAVDPASAPAKLSNVEASKKAVLGGSRRRGAANLGKLDLNVEFSNEVEEAAAGGAKERNVNGTGNPEDNIEGIGFFEGLDEFLSSLPILNVVADDKMIRLPGH* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4927 501 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 337 - -
Psa1g4927 501 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 338 495 - -
Psa1g4927 501 Pfam DnaJ domain 67 129 IPR001623 -
Psa1g4927 501 MobiDBLite consensus disorder prediction 181 213 - -
Psa1g4927 501 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 337 - -
Psa1g4927 501 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 338 495 - -
Psa1g4927 501 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Psa1g4927 501 MobiDBLite consensus disorder prediction 330 380 - -
Psa1g4927 501 MobiDBLite consensus disorder prediction 181 241 - -
Psa1g4927 501 CDD DnaJ 67 121 IPR001623 -
Psa1g4927 501 MobiDBLite consensus disorder prediction 356 373 - -
Psa1g4927 501 Gene3D DnaJ domain 58 138 IPR036869 -
Psa1g4927 501 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Psa1g4927 501 SMART dnaj_3 66 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4927 Psa-Chr1 364607768 364609493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4927 238 495 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.931 4.08e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4927 - - lja:Lj6g3v2193500.1 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4927 1 364607768 364609493 Psa1g4927 1 364607768 364609493 ECH