Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4862 TTCATCACAAACACTTACACTAATAATGGAAACGTGGTTCATAGCGCTACTCTCTCTCTGCATCATCTTCCTCATCAGAGCCACCGTCTCCACCCTCACCACCACCACCACCAAAACCGCCACTCTCCCTCCCGGTCATTCATAGCGCTACTCTCTCTCTGCATCATCTTCCTCATCAGAGCCACCGTCTCCACCCTCACCACCACCACCACCAAAACCGCCACTCTCCCTCCCGGTCCTTTCCACATCCCCGTTCTCACAAGCATCCTATGGCTCCGAAAATCCTTCGCCCAACTCGAACCTTTACTCAAAACCCTCCACGCCAAATATGGTCCTATCATCACTCTCAGAATCGGTTCTCGACCTTCCGTTTTCATCGCCGACCGTTCTCTCGCTCACCACGCTCTTGTTCATAACTCATCAATCTTCTCCGATCGTCCTAAAGCACTTCCCACCGGGAAACTCACGTCCAGCAACCAACATAATATCAGTTCCGCTTCTTACGGTGCCACGTGGAGGACCCTCCGTCGTAATCTTGCCTCCGAGATGCTTAATCCGTCGAAAATCAAATCTTTCTCGGAAATCCGGAACTGGGTCCTGGACGCTCTCATCAACCGTCTCAAAACAGCGTCGGAGTCGGAATCCTTTACGTTTGTTCCTCACTTTCATTACGCCATGTTTTGTTTACTTGTTTTTATGTGTTTTGGTGAAAGACTTAACGATGAGAAAGTTAATGAAATTGAACGTGTACAGAGGAAGCTTCTGTTGAGTATGAGTAGATTCAATGTATTGAATTTCTGGCCTGAGGTTACTAAGATTTTGCTGCGCAAACGATGGGAGGAGTTGTTGAAGTTGCTTAAGGATCAAGAAGATGTTCTTCTTCCGCTGATAAGAGCGAGGAAGCAAAATAAGGAAAGTAAGAGTGTTGTTTCTTATGCGGATACTCTTTTGGAATTGGAGTTAAAGGAGGAGAAACGCAAGTTGACTGAAGAGGAAATGGTTACTCTTTGTTCCGAGTTTTTGAATGGTGGCACGGACACAACTTCGACGGCTTTGCAGTGGATTATGGCGAATTTGGTGAAGTATCCGGACGTGCAGAGAAAGCTTGTGGAGGAGATTAGAGAGGTGATTGGTGGTGATGATAATGGATTCAAGAAGGAAGTGAAAGAGGAAGATTTGCAGAAACTTCCTTATCTGAAATGTGTGGTTTTGGAAGGGTTGAGGCGTCATCCACCCGGGCATTTTGTGTTGCCCCATGCTGTGACAGAAGATGTGGTTTTGAATGGTTATTTGGTGCCTAAAGATGGGACGGTGAATTTTATGGTGGCGGAGATGGGGTGGGATCCTCTCGTTTGGGAGGATCCCATGGAGTTTAAGCCGGAGAGGTTTTTGGAAGATGAAACGTTTGATATTACAGGAAGTAAAGAGATAAAGATGATGCCGTTTGGAGTTGGGAGGAGGATTTGTCCTGGATATCAATTAGCTTTGCTTCATTTGGAATATTTTGTGGCCAATTTGGTTTGGAATTTTGATTGGAAGGTTCCTAAGGGTGGAGTTGTTGATTTGTCAGAAAAACAGGAATTTACTATGGTTATGAAAAATCCGTTACAGGTTCATATTTCTCCTAGGATCTAG 1635 0.455 FITNTYTNNGNVVHSATLSLHHLPHQSHRLHPHHHHHQNRHSPSRSFIALLSLCIIFLIRATVSTLTTTTTKTATLPPGPFHIPVLTSILWLRKSFAQLEPLLKTLHAKYGPIITLRIGSRPSVFIADRSLAHHALVHNSSIFSDRPKALPTGKLTSSNQHNISSASYGATWRTLRRNLASEMLNPSKIKSFSEIRNWVLDALINRLKTASESESFTFVPHFHYAMFCLLVFMCFGERLNDEKVNEIERVQRKLLLSMSRFNVLNFWPEVTKILLRKRWEELLKLLKDQEDVLLPLIRARKQNKESKSVVSYADTLLELELKEEKRKLTEEEMVTLCSEFLNGGTDTTSTALQWIMANLVKYPDVQRKLVEEIREVIGGDDNGFKKEVKEEDLQKLPYLKCVVLEGLRRHPPGHFVLPHAVTEDVVLNGYLVPKDGTVNFMVAEMGWDPLVWEDPMEFKPERFLEDETFDITGSKEIKMMPFGVGRRICPGYQLALLHLEYFVANLVWNFDWKVPKGGVVDLSEKQEFTMVMKNPLQVHISPRI* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4862 544 SUPERFAMILY Cytochrome P450 77 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PANTHER CYTOCHROME P450 46 542 - -
Psa1g4862 544 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 46 542 - -
Psa1g4862 544 PRINTS E-class P450 group I signature 107 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 131 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 225 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 441 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 Pfam Cytochrome P450 77 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Psa1g4862 544 Gene3D Cytochrome P450 69 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4862 544 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4862 Psa-Chr1 362296685 362299168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4862 71 543 Cytochrome P450 AT1G64950 60.082 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4862 K24184 - gmx:100792037 704.131