Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4861 ATGGAAACATGGTTCATTGCACTACTCTCACTCTTCATCATCTTCCTCATCAAAGCCACTATCTCCACCCTCACCACCCCCACACTCCCTCCCGGTCCACTCCACATCCCCGTCCTCACAAGCATCCTATGGCTCCGAAAATCCTTCGCCCAACTCGAACCTTTTCTTAAAACCCTCCACGCCAAATATGGTCCTATCATCACTATTAGAATCGGTTCTCGAGTTTCTGTTTTCATTGTTGACCGTTCCATATCTCACAATGCTCTCATTCATAACTCATCAATCTTCTCCGGTCGTCCTAAAGCACTTCCCACCAGCATACTCATGTCTAGTAACCAGCATAGTATCAGTTCAGCTTCTTACGTTTGTTATGCAGCAACGGCCAAGATTCTTGTAGTGCTCAATGATACCATACCTTTGGTTCCAATTTCCCGAGATCACAACGTTTGGATTGAAACATACATTCTCATCCATCGTCTTAAAACCGCTTCGGAGTCGGAGTCCTTTACTGTTGTTCCTCACTTTCGTTATGCCATGTTTTGTTTACTTGTTTTTATGTGTTTTGGTGAAAGAGTTAACGCTGAGAAAATTAGTGAAATTGAAAGTGAAGAAAGGGCGCTTCTGTTGAGTATAAGCAGATTCAGTATATTGGATTTCTGGCCTGAAGTTACTAAGATTTTGCTGCGGAAACGATGGGAGGAGTTGTTGAAGTTGCGTAAGGATCAAGAAGATGTTTTGCTTCCGCTGATAAGAGGGAGGAAGCAAAATAAGGAAAGTAGATTGAGCGATGTTAACAGTGTTGTTTCTTATGCAGATACTATTTTGGAATTGGAGTTAAAGGAGGAGAATCGCAAGTTGAGTGATGATGAAAAATCCATTACAGTAAAATCTAAAGACTTGTTCATGGAGCCATCCATAATATCACCCACCATCATTCCCACAACTTCATGGTGTACACCCAAAAGGTTACTTGCTATATTTTGTGTGATTAACTTGTTAACCTATTTGGATCGAGGAGCAATAGCTAGCAATGGTGTTAATGGTAGTAAAGGAACATGCACTAAAGGTGCTGTTACTTGCACTTCTGGTACAGGAATACAGGGGGACTTTAACTTGAACAATTTTGAAGATGGAGTTTTATCATCTGCTTTTTTGGTAGGAATTATGGTGGCTTCTCCAATTTTTGCCTCTCTAACTAAAAGTGTAAATCCATTTAGACTTATAGGAGTTGGATTGTCAGTTTGGACTCTTGCAACCTTATTTTGTGGTTTTTCTTTTGATTTCTGGTCCATTTCAGTCTGTCGCATGCTTGTTGGTGTTGGCGAAGCTTCGTTTGTTAGTCTAGCAGCGCCTTTTATCGATGACAATGCCCCGGCTTCTCAGAAAACAGCGTGGCTCGCAGTATTTTACATGTGTTTACCATTGGGATATGCAACTGGCTATATCTATGGTGGTTTGGTCGGGAGTCATTTTGGTTGGCGTTACGCATTCTGGATAGAGTCTGCATTGATGCTTCCATTTGCTATTTCAGGATTTTTAATGAATCCTTTAGAGTTAAAAGGGTTAGTTCCCGCCGATTTGATAAAGGCAGAAGTACCAGAGGATAAATCCAATTCTACTACATCTAAGGCGAAAATATTCGATGAGTTCTCAAGATTTTGGATTGATATGAAAGCGCTTCTGCTTAATAAGGTTTATGTTATTAATGTTCTAGGTTACATAGCGTACGACTTTGTCTTAGGTGCGTACTCGTATTGGGGTCCGAGAGCGGGCTATAATATTTACCACATGACTGATGCAGATTTGGTATTTGGAGGAATCGGAATGGTATGTGGAATAGTAGGCACATTAGCCGGAGGCTTTGCTCTCGATTTTATGAATAACAGTAACACCTTATCAAATGCATTTCAGCTTCTCTCGGTGACAACACTTTTCGGTGCAGCATTCTGTTTTGGTGCCTTCTTATGCGGAAATGTGAATGCCTTTCTTGCTCTTTTGTCTATCGGCGAACTTATTATTTTTGCCACTCAGGGTCCCGTAAATTATGTGTGTCTACATTGTGTTGAACCAAGATTGAGGCCGCTATCGATGGCTATGTTAACCGTTGCAATTCATCTCTTTGGAGACTTGCCTTCCTCGCCTCTTGTCGGACTTCTCCTTGATAGGACTAACAACTGGAGAACAACTTCGTTGATCCTAACAACCATATTGTTTCCGGCGGCTGGAATATGGTTTATCGGAATATTTGTTCATAGTGTGGATAGATTTGAGGATGATAGTGAGAATCAAGTGTGCACTATACCTTTGCTTCAAGAGAAGACTGAAGAAACATCAACATCTAATGCACAATCTCAAGAATGTTGA 2364 0.4107 METWFIALLSLFIIFLIKATISTLTTPTLPPGPLHIPVLTSILWLRKSFAQLEPFLKTLHAKYGPIITIRIGSRVSVFIVDRSISHNALIHNSSIFSGRPKALPTSILMSSNQHSISSASYVCYAATAKILVVLNDTIPLVPISRDHNVWIETYILIHRLKTASESESFTVVPHFRYAMFCLLVFMCFGERVNAEKISEIESEERALLLSISRFSILDFWPEVTKILLRKRWEELLKLRKDQEDVLLPLIRGRKQNKESRLSDVNSVVSYADTILELELKEENRKLSDDEKSITVKSKDLFMEPSIISPTIIPTTSWCTPKRLLAIFCVINLLTYLDRGAIASNGVNGSKGTCTKGAVTCTSGTGIQGDFNLNNFEDGVLSSAFLVGIMVASPIFASLTKSVNPFRLIGVGLSVWTLATLFCGFSFDFWSISVCRMLVGVGEASFVSLAAPFIDDNAPASQKTAWLAVFYMCLPLGYATGYIYGGLVGSHFGWRYAFWIESALMLPFAISGFLMNPLELKGLVPADLIKAEVPEDKSNSTTSKAKIFDEFSRFWIDMKALLLNKVYVINVLGYIAYDFVLGAYSYWGPRAGYNIYHMTDADLVFGGIGMVCGIVGTLAGGFALDFMNNSNTLSNAFQLLSVTTLFGAAFCFGAFLCGNVNAFLALLSIGELIIFATQGPVNYVCLHCVEPRLRPLSMAMLTVAIHLFGDLPSSPLVGLLLDRTNNWRTTSLILTTILFPAAGIWFIGIFVHSVDRFEDDSENQVCTIPLLQEKTEETSTSNAQSQEC* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4861 787 Pfam Major Facilitator Superfamily 365 705 IPR011701 GO:0022857|GO:0055085
Psa1g4861 787 Pfam Cytochrome P450 30 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4861 787 ProSiteProfiles Major facilitator superfamily (MFS) profile. 323 754 IPR020846 GO:0022857
Psa1g4861 787 SUPERFAMILY MFS general substrate transporter 309 747 IPR036259 -
Psa1g4861 787 Gene3D Cytochrome P450 24 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4861 787 PANTHER SPHINGOLIPID TRANSPORTER SPINSTER HOMOLOG 2-RELATED 312 771 - -
Psa1g4861 787 PANTHER SPINSTER 312 771 IPR044770 -
Psa1g4861 787 CDD MFS_spinster_like 324 745 IPR044770 -
Psa1g4861 787 Gene3D MFS general substrate transporter like domains 317 749 IPR036259 -
Psa1g4861 787 SUPERFAMILY Cytochrome P450 30 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4861 Psa-Chr1 362277057 362285949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4861 29 290 Cytochrome P450 AT1G64950 44.364 2.33e-66 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4861 K23677 - gmx:100812572 743.421