Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4836 ATGGCTTCCCGGAACCAGAACCGGCCACCGCGAAGTCCCTCCACTATGCAGAAAAAAGGGGTAGGTGCTGAGGAAATTCCTTCTGACAAGCGGAGAAGGATTGGTGGTGAAAAATTGGTGGGACTGGGTAGAGGTAGGGCTCCATTTGGTGCGCTCAACAACAAATCGGAAGTCAATGAAGTTAGTGGTGCTGGTGGTGGTTCTTCCGACGGATCTGAAGGTAGTGTAGTTGATTTCACTGAAGAGGAAGTAGATGCTCTGTTGGAAGAGAGGATGAAAAAGGGGATTCCCCGTGATACTAAGAAAAAAATGGAGAATATGGTGGATCTAATCAAGAGACTTAAACAATGTGTAAGGTGGTTTAAGGGTAAAAAGGAGAAGCTTCAGACAGATCTTGAATCAGCTGAGAAGAAATGCGTTGATACCGAGAATGAGATGAAAACTAAGATAGATGAATTGAACGAGGCCATATTAAATTTGAGGACGACGATTTCTTCTCTAGAAGAGAAGGTTGCAATGGAAGAATCAGATAAACAGGAAGTGACTGAATGTTATCGGAAAGAAAAAGAAGCCAGAAGTGTAGCTGAGCAGACGAACATTTCTCTTTCAACTGAACTTGAGAAAGTTTGTGATGAGAAATCCGCTATTGAACGGAAGGCCATTGCAACTGAGGACCTCTACAAGCGATCACAAGAGTATAATATCAGTTTGCAGCAGTACAATAGTCGCCTTCAGTCAAATCTGGAAACAGTTAATGAGGCACATAAACGACTGGAAACAGAGAAATCAAGTATTGTTGAGAACCTTAGCAATGCAAGAGGCCACAATAAGGCATTGCAAGAGCAGCTGGCATCTCTGAAAGCTTCACAAGACGAGGCTACAAAGGGTAAAGACATGTTAGCCACTGAACTCAAATTCCTCCGAGATGAGTTAAAACAAATTAGAGACGACCGTGATCACCAACTTGGACAAGTACAAGCTTTAACCGGAGAAGTAGCAAAATACAAGGAATATACAGGGAAGTCAAGTGAACAACTGGATACGTTGACGGTTAAAACAAGTGCTCTCGAGGAGGTATGTACTTCACAAAGACAACAAATAGACATGTTGCAGAAGCAGTTGACGGCTGAAAGAGAGAAGTTGAAGATGGCCGATTTGTCTTTTTCAGAAACAAGAACAGTGTTTGAAAAACAGGAAACAGTTATAAGTCAACTACGAGAGAGATTGGCAGAAAAAGAATTCCAAGTAATTGAAGGAGAGTCATTAAGAAAGAAACTGCACAACACTATTCTGGAATTAAAAGGAAATATCCGTGTGTTCTGCCGTGTCCGACCTTTGTTACCGGATGATGGTCCTGCAGCAGACATGGTAGTTTCTTTCCCTTCATCAACAGAAGCTCTTGGCCGAGGCATTGAATTGGCACAGAGCGGGCAGAAGTATTCTTTTTCATTTGACAAAGTATTTAATCAAGAGGCTTCTCAGGAGGATGTTTTCACAGAGATTTCACAGCTTGTACAAAGTGCACTTGATGGGTACAAGGTTTGCATTTTTGCTTACGGACAAACAGGTTCTGGAAAAACCTATACGATGGTTGGCAGGCCTGGTCTCCCTGAGCTGAAAGGCTTGATACCGCGTTCACTTGAACAAATATTTCTCGTTAGTCAATCTCTGAAAGATCAAGGTTGGAAGTACACTATGCAGGCCTCGGTACTTGAAATATACAACGAGACGATAAGGGATTTGTTAGCACCCACCGAAAATCCTGGAAAAAAGTACAATATTATACACGATGCCAATGGAAAAAACACATATGTTCCCGACCTGACTATTGTGGACGTGTGCGGTGCAGATGAGATTTCCACTCTCCTACAACGGGCTGCACAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAATCGTCACGAAGTCACTTTGTTTTTACTCTTCGCATAAGCGGCATTAATGAGAACACCGAGCAACAGGTTCAAGGTGTGCTAAACCTGATTGATCTTGCTGGAAGTGAAAGACTGTCAAAAAGTGGAGCAACTGGGGACCGTTTGAATGAAACTAAGGCGATAAACAAAAGTCTTTCCTGTTTGAGTGATGTCATTTTTGCCTTGGCGAAAAAAGAGGATCATGTCCCCTTCAGGAATTCTAAACTGACAACCCTTCTCCAGCCATGTCTTGGTGGAGATTCAAAGACTTTAATGTTTGTAAATATTTCGCCTGACCCAACTTCAACAGGAGAGTCACTTTGTTCTCTTCGTTTTGCCGCGAGAGTAAATAGTTGTGAGATTGGTATTCCTCGGCGCCAGACATCCACGAAGTCCTCCTCCGATTCTCGTTTGAGCTACGGCTAA 2364 0.4285 MASRNQNRPPRSPSTMQKKGVGAEEIPSDKRRRIGGEKLVGLGRGRAPFGALNNKSEVNEVSGAGGGSSDGSEGSVVDFTEEEVDALLEERMKKGIPRDTKKKMENMVDLIKRLKQCVRWFKGKKEKLQTDLESAEKKCVDTENEMKTKIDELNEAILNLRTTISSLEEKVAMEESDKQEVTECYRKEKEARSVAEQTNISLSTELEKVCDEKSAIERKAIATEDLYKRSQEYNISLQQYNSRLQSNLETVNEAHKRLETEKSSIVENLSNARGHNKALQEQLASLKASQDEATKGKDMLATELKFLRDELKQIRDDRDHQLGQVQALTGEVAKYKEYTGKSSEQLDTLTVKTSALEEVCTSQRQQIDMLQKQLTAEREKLKMADLSFSETRTVFEKQETVISQLRERLAEKEFQVIEGESLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVSFPSSTEALGRGIELAQSGQKYSFSFDKVFNQEASQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMVGRPGLPELKGLIPRSLEQIFLVSQSLKDQGWKYTMQASVLEIYNETIRDLLAPTENPGKKYNIIHDANGKNTYVPDLTIVDVCGADEISTLLQRAAQSRSVGRTQMNEQSSRSHFVFTLRISGINENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPTSTGESLCSLRFAARVNSCEIGIPRRQTSTKSSSDSRLSYG* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4836 787 Coils Coil 241 317 - -
Psa1g4836 787 Coils Coil 395 415 - -
Psa1g4836 787 MobiDBLite consensus disorder prediction 55 75 - -
Psa1g4836 787 Pfam Kinesin motor domain 442 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 787 - -
Psa1g4836 787 MobiDBLite consensus disorder prediction 23 39 - -
Psa1g4836 787 Coils Coil 118 177 - -
Psa1g4836 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 764 IPR027417 -
Psa1g4836 787 CDD KISc_C_terminal 434 767 - -
Psa1g4836 787 ProSiteProfiles Kinesin motor domain profile. 436 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 PRINTS Kinesin heavy chain signature 511 532 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 PRINTS Kinesin heavy chain signature 635 652 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 PRINTS Kinesin heavy chain signature 666 684 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 PRINTS Kinesin heavy chain signature 715 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 Gene3D Kinesin motor domain 381 767 IPR036961 -
Psa1g4836 787 SMART kinesin_4 434 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g4836 787 MobiDBLite consensus disorder prediction 1 76 - -
Psa1g4836 787 Coils Coil 360 380 - -
Psa1g4836 787 ProSitePatterns Kinesin motor domain signature. 665 676 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa1g4836 787 PANTHER KINESIN-LIKE PROTEIN 3 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4836 Psa-Chr1 361535795 361542210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4836 408 777 Calmodulin-binding Proteins AT5G65930 39.314 5.16e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4836 K10405 - gmx:100808278 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2424 7 171510187 171515718 Psa1g4836 1 361535795 361542210 PCT