Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4832 ATGGCACCACCAAAGAGACTCCGTCCCGCTCCGCTTGACGATCCTCCCACCGCCTCCTCCTCCTCTGACGATGACCTACCACCGCCTAAAAATCAAGAAGATGAAGTAGTCGATGAAGAAGAGGAAGATTCATCCGAAGAAGGAGAAGAAGAAAACGACGAGGATGAGGATGAAGATGAAGGTTCTTCATCCGAAGAAGAAGAAGTTCAACCTACACCTCCTTCACAACTTGCTTCCAAAAACCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGAATCTGCTTCCGAATCTGAATCCGAGTCTGGTTCCGGATCAGAATCTGGATCCGATTCTGATTCTGAACCGGAACCTACTCCATCTCCCAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAGACTCAATCACAAGCCCAATCCACTCCGATACCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCTACACGTGCTAAGAAGAAAACAACCGCCGCCGGTGGTGGTTCCAACGACGAGAACGACGAGGATGTAGATGGTGACGTGAAAATGTCCGGTGAAGACTCGAAGAAGATCCATCAGAGAATCTTTACAGAAGAAGACGAGATCGCCATTCTCAAAGGCCTCGCTGAGTTCATTTCCAAAACTGGAAAGGATCCGATGAAGGATCCATCAGCATTTCACAGTTTTGTGAAGAAATCCATTCATGCAGATGCCAACAGCGAGCAGCTGAAGCGGAAGGTCCGTGGTTTGAAGATGAAGTTCAGCTCCAGTGGTAGTTTCACTAGAGAGCATGACAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATAATGGAGCCAATGAAGCTGAAGAAAATGGGAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAAGAAGCTCCTATAAGAAACAATGGTTCTACTAAGAAAGAAGTAGTTACCAAGAAGGGTACTGGAAAATATGAGAGTGATGTTGATAAAAGCTTGGCTTTTAGTGAAATGAGTAGTTTTGGTGATGCTGCGGGGTTGTCCTTGTTGAACAAGGATGCCATGAGAAGGGGAATGGAATTGATGGGGGAATCTAAGGTAGATGAGTTTGATGCCAGATGGAGGAAGGTTCAAATTGCGGAGATGGAAGTGTTTGTGGCTCGCGGGCAGCTGATTAAGGATCAGACTAGGATGGCATTGGAGGCATACAAGAAATCAATCAATTAG 1236 0.4628 MAPPKRLRPAPLDDPPTASSSSDDDLPPPKNQEDEVVDEEEEDSSEEGEEENDEDEDEDEGSSSEEEEVQPTPPSQLASKNPPPSTPISNPKPESASESESESGSGSESGSDSDSEPEPTPSPNAKVKPLASKPMKTQSQAQSTPIPARSGTKRANENGSTRAKKKTTAAGGGSNDENDEDVDGDVKMSGEDSKKIHQRIFTEEDEIAILKGLAEFISKTGKDPMKDPSAFHSFVKKSIHADANSEQLKRKVRGLKMKFSSSGSFTREHDKKAFELSKKVWGNNGANEAEENGKVNEKTPKSTKKEAPIRNNGSTKKEVVTKKGTGKYESDVDKSLAFSEMSSFGDAAGLSLLNKDAMRRGMELMGESKVDEFDARWRKVQIAEMEVFVARGQLIKDQTRMALEAYKKSIN* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4832 411 PANTHER BNAANNG10740D PROTEIN-RELATED 11 409 IPR007592 GO:0006355
Psa1g4832 411 MobiDBLite consensus disorder prediction 34 66 - -
Psa1g4832 411 MobiDBLite consensus disorder prediction 133 174 - -
Psa1g4832 411 MobiDBLite consensus disorder prediction 91 120 - -
Psa1g4832 411 MobiDBLite consensus disorder prediction 282 325 - -
Psa1g4832 411 PANTHER STOREKEEPER PROTEIN-LIKE 11 409 - -
Psa1g4832 411 MobiDBLite consensus disorder prediction 1 193 - -
Psa1g4832 411 MobiDBLite consensus disorder prediction 291 325 - -
Psa1g4832 411 MobiDBLite consensus disorder prediction 76 90 - -
Psa1g4832 411 Pfam Protein of unknown function, DUF573 198 282 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4832 Psa-Chr1 361400719 361401954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4832 11 407 GeBP Transcription Factor Family AT1G61730 28.365 1.39e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Psa1g4832 DUF573 6.5e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4832 - - mtr:MTR_2g010790 364.385