Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4827 ATGCTTGGAATTTGTGTTTCTTTCAAGAGGAAGTTACAATGCAAACCCGAGGCAAAACAAGTTCATGAACCAAAGACATCATGGCAGCAAAATGGCAACACTACTGCAAATAATGAGAAAACAAAGTCAGGTTTACTTGAGTATTCAAACATCATCCAAGGAAGCAAGAGGTACTTAAAAAAATCACTAAGTTTGAATCCAAAATCTGAAGGGATGATGATTGATATAAGTGATCCTATAAACCATGAAATTCTTGATGATGATAGTGATTTGGAAGGTTGTTATAGATCAATAACAAGGGCTTCATCAACATCTTCAAGGTTAAGCAATCGTGTTTACTATAATGAAGAAAATGTCTTATCTAATACAAGGTCGTTGGTTCATATGGATGGTCCTTCAATGTTGAAATGTTACAATTATGGTGACAAACTCAACAGCCATAATACTGTTGAAGCACACCATATCACCGAGCATTCAGTCACGGAAATTGAAGAAGAATCATCCCGGCAGATAGTAGAAACAATATGTGGAAGAGGAAGAAGCTTGGTTAGTTCAGAATTGTGGGAGATCGATTGCATGTTAAAAGTCCACAACAAGCCAAAAACACTAGCATGCTTTGACAAGTGTAGAGAAATGGTGAAGATTAAGGCAAACACTAGCAAGAACCATCCACGTTGTCTTGCTGATGGAAATGAGCTTCTAATGTTCCATGGCACTAACATTGCATGCTCTCTTGGCACAAACAGTTGTTATAGTTTGTGCAATTTAGACTACTGTGGTGTGTGTCAAATTCTAAGAAATGGTTTCTCTGCTAACAAAGAATTTCAAGGTGTATCAGGTGTTTTTACGAGTTCCACAAGGGGAAAAGCCCTTGATTCTGTTATGATATTTGATGAGAGTGAATGTACAAGAAAATCAGTTATAGTTTGTAGAGTAATAGCTGGGAGAGTTCATTATCATTTTGAAGAAATTCACGAAGATTTTGAATCAAAATTTGATTCATTGGCAAAAAAGGTAAGTGATCATTCAGATATTGAGGAACTATACTCGTTGAATTCTAAAGCTCTACTCCCTTGTTTTGTGGTAATCTACAAACAACAAACGGTGAATATTTGA 1116 0.3611 MLGICVSFKRKLQCKPEAKQVHEPKTSWQQNGNTTANNEKTKSGLLEYSNIIQGSKRYLKKSLSLNPKSEGMMIDISDPINHEILDDDSDLEGCYRSITRASSTSSRLSNRVYYNEENVLSNTRSLVHMDGPSMLKCYNYGDKLNSHNTVEAHHITEHSVTEIEEESSRQIVETICGRGRSLVSSELWEIDCMLKVHNKPKTLACFDKCREMVKIKANTSKNHPRCLADGNELLMFHGTNIACSLGTNSCYSLCNLDYCGVCQILRNGFSANKEFQGVSGVFTSSTRGKALDSVMIFDESECTRKSVIVCRVIAGRVHYHFEEIHEDFESKFDSLAKKVSDHSDIEELYSLNSKALLPCFVVIYKQQTVNI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4827 371 SUPERFAMILY ADP-ribosylation 193 366 - -
Psa1g4827 371 MobiDBLite consensus disorder prediction 19 40 - -
Psa1g4827 371 Gene3D - 148 369 - -
Psa1g4827 371 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 366 - -
Psa1g4827 371 MobiDBLite consensus disorder prediction 23 40 - -
Psa1g4827 371 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4827 Psa-Chr1 361013463 361024014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4827 4 365 C2H2 Transcription Factor Family AT5G54630 35.857 5.02e-72 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4827 - - gmx:100792577 372.859