Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4817 ATGATGATCACAACAAACCACTACCAAACCTTATTTTCGTTTGCCTGTTTGTCATGTTTCATCTGTTTCTGCTCAGAATTCCCATGTGCCGCTTCAACTTCCATAGTCAGTATCAAACATGGTGATTTCATCAGAGACAAAGAAGGCGAAGTTTTAGTCTCCAATGGCTTCAACTTCGTGATGGGTTTCTTCGGTTTTCAAAACTCTTCTTCTCGTTACGTTGGAATTTGGTACTACAACATTCCTGGACCTCAAGTTATTTGGGTAGCAAACAGAAACAAACCCATCAATGGCAACAATGGTTCCTTCACTATATCAACAAACGGAAATTTAGTTATCCTCGACGAAAACGAAAAACATGTCTGGTCTACCAATGTTTCCATCATTCAAAACAACAAAAACAACTCCGAAGCTGTTCTTAAAGATGATGGTAATCTTGTTCTTTCAAATGGGAGAGTGGTGTTATGGGAAAGCTTTGAAAATCCAAGTGATACTTATCTACCTGGCATGAAAGTTCATGTGAATGGGAAGAGTAAGAAGAAGAGGAAGAGCTTTTTCTTAACCTCATGGAAATCAAGTACAGATCCTTCATTAGGGAACCATACTATGGGAATTGATCCTGAAGGGTTACCACCACAGATAGTAATTTGGGAAGGAGAGAAAAGAAAATGGAGAAGTGGTTATTGGGATGGTAGAATTTTTACTGGTGTTAATATGACAGGTAGTTCTCTTCATGGTTTTATACTTAATATGGATATTAATGGAGGAGATAGGTATTTTGTTTATAATAATGAGTTAATGTTGAATGGTACTAGTTTTGTGAGGTTTCAGATTGGTTCGGATGGTTATGAAAGAGAGTTTATTTGGAATCCAAATGAGAAAAATTGGACTCAGATACAAAAAGGGCCTCAAAATGAGTGTGAGATTTATAACTTTTGTGGTGGTTTTGCAGTTTGTGATTTGTTGGTTTCTGGTTCGGCTACTTGTAGTTGCTTACAAGGGTTTGAACTAAAGGATAAAGGAGATTTGTCAGGTGGATGTAGGAGGATGACAGCATTGAAGGGTGATATGAGGAATGGTAGTTTTGGAGAAGATGGTTTCTTCAAGCTTAGGTGTATGAAGTTACCCGATTTCGCGAATGTGGTTGATACTACGGATTGTGAAGGTGATTGTTTGAAGAATGGTTCTTGTACTGCTTATGCAGAAGTTATTGGAATTGGTTGCATGGCTTGGTATGATGAGCTGATAGATGTTCAAAAGTTTGAACATGGAGGGAATACATTGCGCATTCGTCTTGCTCATTCGGATTTACACGACGGAAGGAAAAACAAAGCGGTCGTGATTGTGATAATATTGGCTGTTCTAGCAGGGCTAATCTGTCTAGGAATGTTTGTATGGTTGGTTAGGAGGAACAAGAGAAAACTCAAAGTTTCTACTGATTCGCGTCGCAAAAATAGTGATCTAATACCAACGTTTGATGCAAGAAAGAGCAGAGAGGTGTCTGCAGAATTTTCAGGACCAGGATCAGTTGAACTTAGTCTGGAAGGAAATCAACTAAGCAAAACTAAGCTTCCATTTTACAATTTTAGTTGCATGTCAGCAGCAACCAACAATTTTTCTGAACAAAATAAGCTCGGACAAGGCGGTTTCGGTCCTGTCTACAAGGGAAAGCTTCCGACCGGAGAAGAAATAGCTGTTAAGAGGCTTTCGAGACGATCAGGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGATGTTGATAGTGAAATTACAACATAGAAATTTGGTTAGACTAATGGGATATTCTATTGAAGGGGAAGAAAAGTTGCTTGTATATGAATTCATGCCAAACAAAAGCTTGGATTACTTTTTATTCGATCCTATTAAGCAAGCACAATTAAACTGGGCGAGACGTTTTGAAATCATTGAAGGAATTGCAAGAGGACTACTATATCTGCATCGTGATTCAAGACTTAGAGTTATTCATCGTGATCTAAAAGCAAGTAATATTTTGTTAGATGAAAACATGAATCCAAAAATATCAGATTTTGGCCTAGCCCGGATATTCGATGGAAATCAAAATGAATCCAATACAACAAGAGTGGTTGGTACATATGGTTATATATCTCCTGAATACGCTATGGAAGGCCTATTTTCAGTTAAATCAGATGTATATAGTTTTGGCGTATTGCTACTAGAGATTGTGAGCGGACGCAAAAACAGTAGCTTTCGTCATTCAGATGATTCGAGTCTTATAGGTTATGCATGGCATCTTTGGAACGAACGCAGAGCAATGGAACTTGTCGATAGTTGCATTCGCGATTCTAGTCCTAAAAACAATGCATTGAGATGCATACACATAGGGATGTTATGTGTACAAGATTCAGCCGGTCATAGACCAAACATGTCGAATGTTGTGTTGATGCTTGAGAGTGAAGCAACAACTCTTCCTTTACCTGTGCAGCCTTTGATTACTTCCACGAGAAGATATGAGGACAGAGAATTTTACATGGATGGTCTTGATGTTTCAAATGATCTCACTGTCACAATGATAGTAGGAAGATAG 2565 0.3836 MMITTNHYQTLFSFACLSCFICFCSEFPCAASTSIVSIKHGDFIRDKEGEVLVSNGFNFVMGFFGFQNSSSRYVGIWYYNIPGPQVIWVANRNKPINGNNGSFTISTNGNLVILDENEKHVWSTNVSIIQNNKNNSEAVLKDDGNLVLSNGRVVLWESFENPSDTYLPGMKVHVNGKSKKKRKSFFLTSWKSSTDPSLGNHTMGIDPEGLPPQIVIWEGEKRKWRSGYWDGRIFTGVNMTGSSLHGFILNMDINGGDRYFVYNNELMLNGTSFVRFQIGSDGYEREFIWNPNEKNWTQIQKGPQNECEIYNFCGGFAVCDLLVSGSATCSCLQGFELKDKGDLSGGCRRMTALKGDMRNGSFGEDGFFKLRCMKLPDFANVVDTTDCEGDCLKNGSCTAYAEVIGIGCMAWYDELIDVQKFEHGGNTLRIRLAHSDLHDGRKNKAVVIVIILAVLAGLICLGMFVWLVRRNKRKLKVSTDSRRKNSDLIPTFDARKSREVSAEFSGPGSVELSLEGNQLSKTKLPFYNFSCMSAATNNFSEQNKLGQGGFGPVYKGKLPTGEEIAVKRLSRRSGQGLEEFKNEMMLIVKLQHRNLVRLMGYSIEGEEKLLVYEFMPNKSLDYFLFDPIKQAQLNWARRFEIIEGIARGLLYLHRDSRLRVIHRDLKASNILLDENMNPKISDFGLARIFDGNQNESNTTRVVGTYGYISPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNSSFRHSDDSSLIGYAWHLWNERRAMELVDSCIRDSSPKNNALRCIHIGMLCVQDSAGHRPNMSNVVLMLESEATTLPLPVQPLITSTRRYEDREFYMDGLDVSNDLTVTMIVGR* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4817 854 Pfam PAN-like domain 363 418 IPR003609 -
Psa1g4817 854 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 854 - -
Psa1g4817 854 Pfam Protein tyrosine and serine/threonine kinase 542 807 IPR001245 GO:0004672|GO:0006468
Psa1g4817 854 ProSiteProfiles Bulb-type lectin domain profile. 35 161 IPR001480 -
Psa1g4817 854 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 854 - -
Psa1g4817 854 Gene3D - 37 159 IPR036426 -
Psa1g4817 854 CDD PAN_AP_plant 360 433 - -
Psa1g4817 854 Gene3D Phosphorylase Kinase; domain 1 509 614 - -
Psa1g4817 854 PIRSF SRK 6 854 IPR024171 GO:0004674
Psa1g4817 854 SUPERFAMILY Protein kinase-like (PK-like) 525 835 IPR011009 -
Psa1g4817 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Psa1g4817 854 SMART serkin_6 539 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4817 854 CDD STKc_IRAK 545 810 - -
Psa1g4817 854 Pfam D-mannose binding lectin 86 191 IPR001480 -
Psa1g4817 854 CDD B_lectin 49 162 IPR001480 -
Psa1g4817 854 SMART blect_4 43 162 IPR001480 -
Psa1g4817 854 ProSiteProfiles EGF-like domain profile. 303 341 IPR000742 -
Psa1g4817 854 Gene3D Transferase(Phosphotransferase) domain 1 615 816 - -
Psa1g4817 854 Pfam S-locus glycoprotein domain 224 338 IPR000858 GO:0048544
Psa1g4817 854 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 196 IPR036426 -
Psa1g4817 854 ProSiteProfiles Protein kinase domain profile. 539 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4817 Psa-Chr1 360644015 360647124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4817 446 822 Receptor kinase-like Gene Family AT4G23230 52.646 6.89e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa1g4817 PK_Tyr_Ser-Thr 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4817 - - aprc:113869342 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2467 7 174205584 174240271 Psa1g4817 1 360644015 360647124 PCT