Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4807 ATGTTTCCAAGATCAACGCACGAAACATTTGCTGAAAAGCTATATCAACACTTAAGGACAATAAGCGATTCAGCAAACCGAAGTTGTCACGAACTGACTTCACCATCAATCACTATGCTGGTGATTCCTGATGAGATGACGGCTTGCAATAGACTTCTAGATAAAGCAAACCTTAAAGATTATCAGATAGGAAAGCAAAGTTTTCCTGAGACAGGTCAAATGGCAGAACTAGATGCATGTCGTGCCGAGGTCCTAGGAAGATCCGCAATCGTTATTCAGAAAAAAGCTCGCACATATATTTGTGAGAAACAGTACAAGTTATTGCGATTTTCTGCCATAGAACTACAAAGGGCTATTAAAGGACACTTGCAAGACGTCGGTATGAATGCATGA 393 0.4046 MFPRSTHETFAEKLYQHLRTISDSANRSCHELTSPSITMLVIPDEMTACNRLLDKANLKDYQIGKQSFPETGQMAELDACRAEVLGRSAIVIQKKARTYICEKQYKLLRFSAIELQRAIKGHLQDVGMNA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4807 130 Gene3D - 3 124 - -
Psa1g4807 130 PANTHER MYOSIN 41 124 - -
Psa1g4807 130 PANTHER MYOSIN 1 19 - -
Psa1g4807 130 PANTHER MYOSIN HEAVY CHAIN 41 124 - -
Psa1g4807 130 PANTHER MYOSIN HEAVY CHAIN 1 19 - -
Psa1g4807 130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 123 IPR027417 -
Psa1g4807 130 Pfam IQ calmodulin-binding motif 87 106 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4807 Psa-Chr1 360196274 360197782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4807 44 123 Myosins gene family AT1G04160 50.617 3.04e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4807 K10357 - gmx:100791031 120.938