Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4805 ATGCGACGAGGTTTCTTCTTCTTGTTCTTCTTCCTCTTCTTGTTCATCACAATCTCAACCTCTACCGTCACAGACACCTTAACCTCAACACAAATTCTCAGAACAAATCAAACCCTTGAATCTCTTCAGGGATCATTCGTTCTTGGTTTCATCTCAGGAACATATTCCAACCTTTATTTAGCCATATGGTACAAAAACATCCCAGACACAGTTGTTTGGGTCGCAAACAGAGACAACCCTCTTCAAAATTCAACCGACAGCTTTCTCAAAATCGCTGACGATGGAAACATAGTACTTCTCAACTCATCATCACTTTCCAACAACAACAATATCGTTTGGTCTTCGAATCAAACAAATGCGAATAACCAAGTTCTTGTTCTTCAGCTTTTAGACACTGGAAATTTAGTACTCAGAGAAACAAACGTGAATGATCCAACAAAATATCTATGGCAAAGCTTCGATTACCCGACAGATACTTTGTTACCAACCATGAACATGGGTTGGAACTTCGACAAAAAAACGGAAAAACACTTAACATCATGGAAGATCACAGGTAAAGATCCTTCTTCAGGTGATTATTCGTTCAAGATTGATTTTCATGGTTTACCAGAAGTTTTCCTGCGGAATGATGATAGCATAATATACCGAAGTGGACCTTGGAATGGTGAAAGATTCAGCGGTGTACCAGAGATGCAACCTGGTACAGATTCAATAGTTTTCAGTTTCTCATCAAACGAACACGGTGTTAACTACTCGTTTTCGATTGAAAATAAGTCGATTTTTTCGAGACTTATAGTGAATTCCAATGGTCAACTTCAACGTCTTACTTGGGTTCAAAGTAGTAAAACATGGACAACGTTTTGGTATGCGCCGAAAGATCAATGCGATGAATACAGAGAATGTGGTCCTTATGGTGTATGTGATTCCAACGCTTCGCCGGTTTGTGAATGTGTGAAAGGCTTTAGTCCTAGGAATGAACAAGCTTGGAAATTGAGAGATGGATCTGATGGGTGTGTGAGGGATACGGATTTGGATTGTGAAAGTGATAAGTTTTATCATATGGAGAATGTGAAGTTACCTGAGACAACATCTGTGTTTGTGAACAGAACAATGGAGATTGATGAATGTGGTGAACTGTGTCATGAGAATTGTTCTTGTACTGGTTATGCTAATGATTATGCAACAAATGGAGGAACTGGTTGTGTTATGTGGTTTGATGAACTTAATGATATTAGAAATTATCCTAATGGTGGACAAGATCTCTTTGTTAGATTAGCAGCTTCTGAGCTAGATAACTCAGGATCTACTAGTGGCTCTCACAAGAAAAGTCATAAAGCTGAGATAATAGGAATCACAATTTCTGCAGCTGTTATAGTTTTGGGACTGTGTATCCTTTTATGTAAGAAGAGGAAATTGCTAAGTCATGGAAAGACAGACAACAGAGGTTCTATCCAAAGAAGTAGAGATTTGTTGATGAGTGAGGTGGTTTTTTCAAGTAATAGAGGAACCTCAGGAGACAGGAACATGGATGAACTAGACTTGCCCATGTTTGATTTTAATACCATAATTATAGCTACAAATGACTTCTTGGAAGAAAATAAACTCGGACAAGGAGGTTTTGGTAGTGTTTACAGGGGAAGGTTGATTGAAGGGCAAGAAATTGCGGTCAAGAGGTTATCAAAAACTTCGGGGCAAGGAAATGAAGAATTTAAGAATGAGGTCAAGTTAATTGCCAAGCTTCAACATCGAAACCTTGTTCGGCTTTTAGGTTGTTGCATTGACAATGATGAGAAGCTTCTTGTGTATGAGTATATGAAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAAGCTAGAAAACCCTTATTGGACTGGAAAAAGCGATTCGACGTTATATGCGGAATCGCTAGAGGGCTTCTTTATCTGCATCATGATTCAAGACTCAGGATTATCCATAGGGATCTCAAGGCCAGCAATATTCTACTTGACGGTGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATATTTGGCCATGATCAAACAGAAGCAAATACATTGCGAGTCGTCGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCGGTAAAATCAGATGTTTTTAGCTTTGGAGTTCTTGTGCTAGAGATTATAAGTGGAAAGAAAAATAGAGGATTCTACTACGCGAACGATGATATGAATCTTCTAAAGAATGCATGGGGACAGTGGAGAGAAGGAAATGCATTGGAACTCATTGATTCGTCGATTCGCAATTCATATACAGAATCCGAAGTTCTTAGATGCATACATGTTGGACTATTGTGCGTCCAAGAACGCGCCGAAGATAGGCCAACAATGCCTTCAGTTCTCTTGATGCTTGGAAGTGAAACCGCACTAATGCCAGAACCTAGAAGTCCAGGGTTTTCCCTTGGAAGATCAAAGAATCCTCCGGAGACCGATTCATCTTCAAGTAAACAAGACGAAACATGGAGTGTGAACCAAGTTACAGTCACATTGCTTGATGCTAGGTAG 2553 0.3921 MRRGFFFLFFFLFLFITISTSTVTDTLTSTQILRTNQTLESLQGSFVLGFISGTYSNLYLAIWYKNIPDTVVWVANRDNPLQNSTDSFLKIADDGNIVLLNSSSLSNNNNIVWSSNQTNANNQVLVLQLLDTGNLVLRETNVNDPTKYLWQSFDYPTDTLLPTMNMGWNFDKKTEKHLTSWKITGKDPSSGDYSFKIDFHGLPEVFLRNDDSIIYRSGPWNGERFSGVPEMQPGTDSIVFSFSSNEHGVNYSFSIENKSIFSRLIVNSNGQLQRLTWVQSSKTWTTFWYAPKDQCDEYRECGPYGVCDSNASPVCECVKGFSPRNEQAWKLRDGSDGCVRDTDLDCESDKFYHMENVKLPETTSVFVNRTMEIDECGELCHENCSCTGYANDYATNGGTGCVMWFDELNDIRNYPNGGQDLFVRLAASELDNSGSTSGSHKKSHKAEIIGITISAAVIVLGLCILLCKKRKLLSHGKTDNRGSIQRSRDLLMSEVVFSSNRGTSGDRNMDELDLPMFDFNTIIIATNDFLEENKLGQGGFGSVYRGRLIEGQEIAVKRLSKTSGQGNEEFKNEVKLIAKLQHRNLVRLLGCCIDNDEKLLVYEYMKNRSLDSILFDKARKPLLDWKKRFDVICGIARGLLYLHHDSRLRIIHRDLKASNILLDGEMNPKISDFGMARIFGHDQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYANDDMNLLKNAWGQWREGNALELIDSSIRNSYTESEVLRCIHVGLLCVQERAEDRPTMPSVLLMLGSETALMPEPRSPGFSLGRSKNPPETDSSSSKQDETWSVNQVTVTLLDAR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4805 850 MobiDBLite consensus disorder prediction 819 839 - -
Psa1g4805 850 SMART serkin_6 529 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4805 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 222 IPR036426 -
Psa1g4805 850 SUPERFAMILY Protein kinase-like (PK-like) 509 800 IPR011009 -
Psa1g4805 850 CDD PAN_AP_plant 342 426 - -
Psa1g4805 850 Gene3D - 19 153 IPR036426 -
Psa1g4805 850 SMART blect_4 30 156 IPR001480 -
Psa1g4805 850 Gene3D Transferase(Phosphotransferase) domain 1 605 807 - -
Psa1g4805 850 Pfam Protein tyrosine and serine/threonine kinase 532 797 IPR001245 GO:0004672|GO:0006468
Psa1g4805 850 PANTHER - 8 849 - -
Psa1g4805 850 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Psa1g4805 850 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Psa1g4805 850 Pfam Domain of unknown function (DUF3403) 802 850 IPR021820 GO:0004674
Psa1g4805 850 Pfam D-mannose binding lectin 70 182 IPR001480 -
Psa1g4805 850 Pfam Receptor serine/threonine kinase 485 519 IPR022126 GO:0004674
Psa1g4805 850 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Psa1g4805 850 MobiDBLite consensus disorder prediction 810 839 - -
Psa1g4805 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Psa1g4805 850 Pfam PAN-like domain 346 411 IPR003609 -
Psa1g4805 850 Gene3D Phosphorylase Kinase; domain 1 494 604 - -
Psa1g4805 850 CDD STKc_IRAK 535 800 - -
Psa1g4805 850 SMART ntp_6 346 425 IPR003609 -
Psa1g4805 850 CDD B_lectin 30 156 IPR001480 -
Psa1g4805 850 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Psa1g4805 850 PIRSF SRK 1 850 IPR024171 GO:0004674
Psa1g4805 850 ProSiteProfiles Protein kinase domain profile. 529 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4805 850 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4805 Psa-Chr1 360136442 360141229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4805 517 817 Receptor kinase-like Gene Family AT4G11530 63.907 5.10e-134 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa1g4805 PK_Tyr_Ser-Thr 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4805 - - gmx:100797331 1231.47