Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4799 ATGTCTCCTGAATATGCAATGGAAGGATTATTTTCAGAAAAATCAGATGTATTTAGCTTTGGAGTTATGCTCCTCGAGATAATAAGTGGTAAAAAGAATACAAGTTTTTATAATCACGAGGAAGCAATCAACCTTTTAGGATACGTATGGAAACTATGGAATGAAGAGGATATAGTATCTTTGATAGATTCGGAAATATATAATTCAAATAATATGGATCAAATTTTGAGATGCATTCATATTGGACTGCTTTGTGTGCAAGAACTTGCAAAGGAGAGACCTACTATGACAAAAGTTATTTCAATGCTTAATAATGAAATTGATAAATTTCCTCAGCCATGTCAACCTGCATTCATTGATAGGCGAATTGAGGATATAGGAGAGTCATCTCAAAATATTCGCCTCTTCACTTCGATGAATGATGTCACTATCACAAGCTTGCATGGCAGATAA 453 0.3377 MSPEYAMEGLFSEKSDVFSFGVMLLEIISGKKNTSFYNHEEAINLLGYVWKLWNEEDIVSLIDSEIYNSNNMDQILRCIHIGLLCVQELAKERPTMTKVISMLNNEIDKFPQPCQPAFIDRRIEDIGESSQNIRLFTSMNDVTITSLHGR* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4799 150 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 148 - -
Psa1g4799 150 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Psa1g4799 150 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4799 150 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Psa1g4799 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 148 - -
Psa1g4799 150 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4799 Psa-Chr1 360007182 360007717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4799 1 150 Receptor kinase-like Gene Family AT4G21400 47.712 2.04e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa1g4799 PK_Tyr_Ser-Thr 5.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4799 - - gmx:112998788 217.238