Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4791 ATGGATAACACAACAACAATGTTAGCATCATCAAATGTTTCGGAGAGTACATTGATTTGTTATACACCAACCATGACAACAACAAATGGTGTATGGCAAGGAGATAACCCTTTAGATTTTTCTATCCCTGTCTTCATTTTGCAATTAACCTTAATTGTTGTTGCCACACGTTTATTTGTTTTCATCCTCAAACCCTTTCACCAACCTCGTGTCATTGCTGAAATCTTGGGTGGATTGTTTTTGGGGCCATCAGTTCTTGGTAAATATGAAACTTTTGCGAATATTGTATTTCCTCTAAAAAGTGCAATGGTGTTAGAAACAATGGCGAATATCGGGTTGATATACTTTTTGTTCCTAATTGGATTAGAAATGGACATGTCTATTGTGTATCGCACGGGGAGAAAGGCGCTGTCCATTGCGGTTGCTGGCATGATATTTCCGTTTATTGTTGGTATTGGACTATCCTTTGCTTTGAATGATAGACACGAAAGTGTAAATAAATTCAGCTATGATCTCTATCTCGGTATTGTTGTATCGGCTACCTCATTTCCCGTTCTCGCGCGAATGCTTGCCGAGCTCAAACTCATCAACACCGAGTTAGGAAAGCTTGCCCTTTCAACTTCCCTCATCAATGATATGTGTGCATGGGTTTTACTAGCTCTAGCTATTGCTTTATCAGAACAAAACTCGACAACTATGGCTTCGGTTTGGGTTGTATTGTCGAATATTTTCTTTGTGTCTTTTTGTTTTCTCGTTGTTAGGCCAGCAGTGACTTGGTTGATCAAGAAAACTCCCGAAGGAAGACCGTTTAGCGAGTTCCAAATATGTGTTGTACTCGTTGGTGTTATGGTCTCGGCTTTCATTACAGATGTTATTGGAACACATTCGATTTTCGGAGCTTTTGTTTATGGATTAGTGATTCCGAATGGTCCACTTGGAGCTGCTATAATAGAAAAGCTCGAAGACTTTGTTTCGGGGCTTTTAATACCGCTTTTCTACGCTATTAGTGGACTTAAGACTAACATTACCTTAACGCAGGGAAGTCGTTCTTGTGCATTTATATTCACGATCGTTCCTCTCGCTTGTTTTGGAAAGATCCTCGGGACTCTTATTGTTTCAATCCTTTTCGAGATACCAACTCGTGATGGCATTGTTCTTGGTTTAGTTATGAACACCAAAGGTCTTATTGAAATGATTGTGCTAAATATTGGAAGGGAACAAAAGGTATTGGGTGATGAAATATTTTCGATTATGATTATTTTTACACTTATAATGACAGCAATAATTTCACCAATTGTGACACTAATTTATAAGCCACGAAAAATGCTTATGCCTTACAAAAAGAAGACAATGCAAAGTTCAAGAGTTGATGCAGAGTTAAGGGTTTTGGTGTGCATTCATGCTCCTAGAAATGTTCCAACAATCATCAACCTCCTTGAAGCAACACGCCCGAAGAAAAGGTCTCCAATATGTGCTTATGTTCTCCATTTGGTCGAACTCACGGGTCGAGCTTCGGCCATGCTTGTTGTCCACGCCACTAGACAATCAGGAGGTCCAGCACTCAACAAAACACAAGCGCAAACTGAACACATCGTCACTGCATTTCGAAACTTCGAGGAACATGTTAGTTATGTCACAGTCCAACCTTTGACGGCGGTTTCCCCTTACTCTACCATGCATGAAGATATATGCAATGCGGCGGAGGAAAAAAGGGTAGCCATCATTATCATTCCTTTCCATAAAAAACAAACGGTTGACGGAGACATGCTAGAAACAAATCCCGCATTGAGAATGGTGAACCATAACTTATTACAAACCGCTCCTTGTTCGGTCGGGATACTTGTCGATAGAGGCCTTAATGGATCCAATCCTTTAATTTCAAATCAAGCATCTCATCAGGTGGCCGTGTTATTCTTCGGTGGATCGGATGATAGGGAAGCATTATCGTACGGATGGAGAATGTCAAGGCATCCAAATGTTAATCTCACCGTGATGCATTTCATTCAAAGAAAAGATGAAACTCAAACACTAAAGCCCGACAATGATCGGTTAGACGATCAAAGACGTTTAATTTCAAACAAACTAGACGAAGAGTGCATAAACGAGATGAAAATGATAGTTGCAAACGACGATTCAATGAGTTACATAGAGAAAGTCGTGAGTAACGGAGAAGAAACCGTTGCAGCGATAAGAGGAATGAACAATGTCAATGATCTCTTCATAGTTGGTCGAGGTCAGGGAAACTCAGTATCAACATTAACCGAAGGGTTAACGGATTGGAGCGAGTGTCCCGAGTTAGGAGCCATCGGAGATTTGTTAGCTTCTTCCGACTTCGAAACAACGGCTTCCGTGCTTGTCATGAATCAATATGTTGCACAAGGACTAGATGGAGAGGACATTTTTGTAGGTGAAAGACCATGGCAATCATGTGATGATTTTAATAACTTGAGACAACAATATAGGGGAAGATATACAACAGGGCCAATGGGGGCAAATACTCAAACATCTCAATTTTTATAA 2520 0.4036 MDNTTTMLASSNVSESTLICYTPTMTTTNGVWQGDNPLDFSIPVFILQLTLIVVATRLFVFILKPFHQPRVIAEILGGLFLGPSVLGKYETFANIVFPLKSAMVLETMANIGLIYFLFLIGLEMDMSIVYRTGRKALSIAVAGMIFPFIVGIGLSFALNDRHESVNKFSYDLYLGIVVSATSFPVLARMLAELKLINTELGKLALSTSLINDMCAWVLLALAIALSEQNSTTMASVWVVLSNIFFVSFCFLVVRPAVTWLIKKTPEGRPFSEFQICVVLVGVMVSAFITDVIGTHSIFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLIPLFYAISGLKTNITLTQGSRSCAFIFTIVPLACFGKILGTLIVSILFEIPTRDGIVLGLVMNTKGLIEMIVLNIGREQKVLGDEIFSIMIIFTLIMTAIISPIVTLIYKPRKMLMPYKKKTMQSSRVDAELRVLVCIHAPRNVPTIINLLEATRPKKRSPICAYVLHLVELTGRASAMLVVHATRQSGGPALNKTQAQTEHIVTAFRNFEEHVSYVTVQPLTAVSPYSTMHEDICNAAEEKRVAIIIIPFHKKQTVDGDMLETNPALRMVNHNLLQTAPCSVGILVDRGLNGSNPLISNQASHQVAVLFFGGSDDREALSYGWRMSRHPNVNLTVMHFIQRKDETQTLKPDNDRLDDQRRLISNKLDEECINEMKMIVANDDSMSYIEKVVSNGEETVAAIRGMNNVNDLFIVGRGQGNSVSTLTEGLTDWSECPELGAIGDLLASSDFETTASVLVMNQYVAQGLDGEDIFVGERPWQSCDDFNNLRQQYRGRYTTGPMGANTQTSQFL* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4791 839 PANTHER CATION/H + ANTIPORTER 13 831 - -
Psa1g4791 839 PANTHER CATION/H+ EXCHANGER 3 13 831 - -
Psa1g4791 839 Pfam Sodium/hydrogen exchanger family 52 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa1g4791 839 Gene3D - 457 764 - -
Psa1g4791 839 Gene3D - 44 442 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4791 Psa-Chr1 359505752 359509111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4791 14 809 Antiporter Super Family AT2G13620 61.816 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4791 - - gmx:100800514 1218.76