Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4773 ATGCAAACGAGGTATATGGAGAGATCGAACAGTATGGCGAGGGAGAAACGATGCTTAGATTCAACTTCGACTGAGGAAGATCAACCTGAAAGGAAACGACCTGCTTTAGCTAGTGTAATCGTTGAAGCTCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGAAGAGTTGTTAGCGAAGAAGTGGAGCGCGCTTTAGCAAAATTAGGCTCTGCCAATCTTACTGAGAGATCTTCTCCAAAGCGCATAGAAAGCCCAGATGGAGGAAATTTACAGTTACAATTTAGGACCAGGTTGTCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGCGAGAAGGGCACTGCCATACATATTGTCTTGATTGATGCAAACACCAGCCGTGTTGTCACGTTCGGCCCAGCGTCATGTGTCAGACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGACGACGCTTGGAGTCAAGAAGAATTTGAGAGTCATGTTGTGAAAGAGCGAGAAGGAAAACGACCTCTTCTGACTGGTGATCTGCAAGTGACCCTGAAGGAGGGTGTAGGAACACTGTCCGATCTTACATTTACAGACAACTCTAGCTGGATAAGAAGTCGGAAGTTCAGGCTGGGGCTAAAAGTTTCCTCGGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCTTTGACTGATGAGGTATGGAGATTGGAGAAGATCGGTAAGGATGGATCCTTTCACAAAAGGCTGAATAAAGCAGGAATATGTTCTGTTGAAGACGTCCTTCAACTTGTGGTTAGAGACCCACAGAGATTGCGGAATATTCTGGGGAGTGGCATGTCAAATAAGATGTGGGAAGTTCTTGTTGAACATGCAAAGACTTGTGTCCTCAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAATATCTACGAGTTGAGTGGCCTAATCACCAATGACCAATATTACTCTGCTGATTCTCTCTCTGATACCCAAAAGGTAAGTCAACCAGTACAAAATATTCTAAGTGCATGTTTGAATTATGATTTTACAGTTGGTTTTCTTCTCTAG 1179 0.4368 MQTRYMERSNSMAREKRCLDSTSTEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGSANLTERSSPKRIESPDGGNLQLQFRTRLSLPLFTGGKVEGEKGTAIHIVLIDANTSRVVTFGPASCVRLDVIVLEGDFNNEDDDAWSQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLSDLTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKAGICSVEDVLQLVVRDPQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADSLSDTQKVSQPVQNILSACLNYDFTVGFLL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4773 392 PANTHER OS02G0177800 PROTEIN 1 370 IPR012416 GO:0005516
Psa1g4773 392 MobiDBLite consensus disorder prediction 9 33 - -
Psa1g4773 392 Pfam Calmodulin binding protein central domain 257 322 IPR046830 -
Psa1g4773 392 PANTHER CALMODULIN-BINDING PROTEIN 1 370 - -
Psa1g4773 392 MobiDBLite consensus disorder prediction 1 33 - -
Psa1g4773 392 Pfam Calmodulin binding protein C-terminal domain 327 370 IPR046829 -
Psa1g4773 392 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4773 Psa-Chr1 358806430 358813774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4773 1 369 Calmodulin-binding Proteins AT2G18750 77.089 0.0 587