Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4744 ATGAGAACCAACCTTGATGCCTTACAGGACTTCAATGTCCATCTTTACAATCTCCTACTTGAATACAGACCTGGAAGAGATCAAGGAGAGGTGTTAGCAGAGGCTTTGAAGATAACGTTGTGCGACGATGGATTCTATGGCGGCCTCGGTCACAGTAAAGCACCTTTTTCTGAAAAATATCAAGTGCAAAAAAATTTGTTGGAAAATGACACTGGAGGGGGCTCTGTTTCTGGCACAATTCCGAAATATCTACCATATGCGACGGATCCTATTTTAAGCAGCGCCCTTGCCTCTTTACTTTGGGAACTGAGTCTTTTGTCCAAACACTATCATCCAGCCATATCGACAATGGCAACGGTCCTTTCAAGCATGAGCACTGAACAAAACCAATTGTTCCTCTCCAAGTCTTCTCCTCAACTAGCTTTTGGGAACTGA 435 0.4368 MRTNLDALQDFNVHLYNLLLEYRPGRDQGEVLAEALKITLCDDGFYGGLGHSKAPFSEKYQVQKNLLENDTGGGSVSGTIPKYLPYATDPILSSALASLLWELSLLSKHYHPAISTMATVLSSMSTEQNQLFLSKSSPQLAFGN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4744 144 Pfam CBF/Mak21 family 79 118 IPR005612 -
Psa1g4744 144 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 5 42 IPR016903 -
Psa1g4744 144 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 59 142 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4744 Psa-Chr1 357861030 357861538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4744 1 144 Core DNA Replication Machinery Family AT1G79150 56.395 3.39e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4744 K14834 - gmx:100794797 169.859