Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4684 ATGCTCCCACACAAAAACTCTCTTTATCTTCTTCTTCTCTCATCAACTTTCTTCCTTATCTTCACTTCAATCTCTGCCATTGACTTCATCTTCAACCGTTTCATCTCTTCAAACATCTCACTCTTTGGAAACTCCACCATTGATTCTCAAATCCTAACACTCACACATCATCAATCTTTCTCCATTGGTCGTGCTCTTTACCCTAAAAAAATCCCAACAAAAAACTCTTCTTATGTCTACCCTTTCTCCACTTCCTTCGTATTTTCCATGGCACCTTTCGAAGACACACTTCCGGGCCATGGTTTAGTTTTCATCTTCACACCGGTCAAAGGAATCCAAGGAACAAGTTCAGCTCAGCATCTTGGTCTTTTTAACCTTACTAATAACGGAGATTCAAATAACCATGTTTTCGGCGTTGAGTTTGATGTTTTCATGAACCAGGAATTCGAAGACATCAACGACAACCATGTTGGAATAGACATAAATTCTCTCACGTCTGTTGTTTCACATGATGCCGGGTTTTGGCGTGATGATACAAGAAGTGGAAAAGATCAGTTTTTTAAGAAACTGGTGCTGAATAATGGTGAGAATTATCAAGTTTGGATTGATTATGAAGATTCTTTGATTAATGTTACCATAGCAAAATTGGGTATGAGAAAACCTGTTAAACCTTTGTTAAATGTTTCTCTCAATTTATCTGAAGTTTTTGAAGATGAGATGTTTGTTGGATTTACTAGCTCAACCGGGCAATTAGTTCAAAGTCATAAAATTTTAGCTTGGAGTTTTAGCAATACAAATTTTTCATTCAGTGATGAGATTATTACTATTGGTTTACCCTCTTTTGTTCTTCCAAAAGATTCAATTTTTGAGTCGAAACGGTTTGTTGCAGGGTTTAGTGTAGGAGTTTTCTTTATTGTCTGTGTTTTGGTTTTGTTGGTACTGTTTTTGGTTCAGGAGAAGAGAAAGAGAGAAAAAAAGAGAAGTGAAATGGAAGATTGGGAGATGGAGTATTGGCCACATAGAATGTCATATGAAGAAGTTAAAGCTTCCACAAAAGGTTTCTCTGAGGAGAATGTGATTGGAATTGGTGGAAATGGAAAAGTCTATAGAGGTGTTTTAAGAGGAGGAGTAGTGATTGCTGTGAAGAACATTTCTCATGAGAATAATGGAATGAGAGAGTTTCTTGCAGAAGTTTCAACTCTTGGAAGGTTAAAGCAAAGGAATTTAGTAGGATTAAGAGGTTGGTGCAAGAAAAATGCTGGAAATTTCTTGTTAGTTTATGACTATATGGAAAATGGAAGTTTAGATAAGAGAGTGTTTTTTGATTTTGATTGTGATGATGAGAGTAAGATGTTGAGTTTTGAAGATAGAATAAGGATTATTAAAGATGTGGCTCATGCTGTTTTGTATTTGCATGAAGGATGGGAAGTGGAAGTGGTACATAGAGACATTAAAGCTAGCAATGTTTTACTTGACAAAGATATGAATGGAAAGTTAGGTGATTTTGGTTTAGCTAGACTGCAAAACCATGGTCAAGTAGCTAGAACGACTAAGTTGGTCGGAACGGTCGGTTACATGGCTCCTGAAGTGATCAAAACCGGTCGAGCTTCGACTCATACCGATGTTTACATGTTCGGTATCTTGATTTTGGAGGTCATATGTGGAAGGCGACCGTTAGAAGAAGGTAAACCGGGTTTGGTTGAGTTTGTTTGGAAGCTTTTGGAACAAGGGGAGCTTGTGTGTGCACTTGATGAGAGGCTAAAGGCTAAAGGTGAGTTTAGTTTGCAAGAATTGGAGAGAGTGTTGCATTTGGGTTTGTTGTGTGCTTATCCTGAACCTAAATCTAGGCCAAGTATGAGACAAGTGGTGAATGTTTTGGAAGGGAGGAATGAGGGAGGTGAAGAGTCAGAGAATGTGGATAGTAGTTTGTTGCAACAATTGAAATCAAGAGATGTTTTGCATGAGTATTCTCTGTATTTTAGTTATGCTTCACACCCAACTTTTCAAGATATTCCTCAATTTTCATCAACATCTGTTACTTGGTCTGGATCTTTAGTTGAGGGTAGGTGA 2070 0.3763 MLPHKNSLYLLLLSSTFFLIFTSISAIDFIFNRFISSNISLFGNSTIDSQILTLTHHQSFSIGRALYPKKIPTKNSSYVYPFSTSFVFSMAPFEDTLPGHGLVFIFTPVKGIQGTSSAQHLGLFNLTNNGDSNNHVFGVEFDVFMNQEFEDINDNHVGIDINSLTSVVSHDAGFWRDDTRSGKDQFFKKLVLNNGENYQVWIDYEDSLINVTIAKLGMRKPVKPLLNVSLNLSEVFEDEMFVGFTSSTGQLVQSHKILAWSFSNTNFSFSDEIITIGLPSFVLPKDSIFESKRFVAGFSVGVFFIVCVLVLLVLFLVQEKRKREKKRSEMEDWEMEYWPHRMSYEEVKASTKGFSEENVIGIGGNGKVYRGVLRGGVVIAVKNISHENNGMREFLAEVSTLGRLKQRNLVGLRGWCKKNAGNFLLVYDYMENGSLDKRVFFDFDCDDESKMLSFEDRIRIIKDVAHAVLYLHEGWEVEVVHRDIKASNVLLDKDMNGKLGDFGLARLQNHGQVARTTKLVGTVGYMAPEVIKTGRASTHTDVYMFGILILEVICGRRPLEEGKPGLVEFVWKLLEQGELVCALDERLKAKGEFSLQELERVLHLGLLCAYPEPKSRPSMRQVVNVLEGRNEGGEESENVDSSLLQQLKSRDVLHEYSLYFSYASHPTFQDIPQFSSTSVTWSGSLVEGR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4684 689 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Psa1g4684 689 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 9 679 - -
Psa1g4684 689 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Psa1g4684 689 Coils Coil 316 336 - -
Psa1g4684 689 Pfam Legume lectin domain 27 267 IPR001220 GO:0030246
Psa1g4684 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 274 IPR013320 -
Psa1g4684 689 SMART serkin_6 354 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4684 689 CDD STKc_IRAK 360 628 - -
Psa1g4684 689 PANTHER - 9 679 - -
Psa1g4684 689 Gene3D Transferase(Phosphotransferase) domain 1 430 650 - -
Psa1g4684 689 ProSiteProfiles Protein kinase domain profile. 354 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4684 689 SUPERFAMILY Protein kinase-like (PK-like) 328 627 IPR011009 -
Psa1g4684 689 Pfam Protein kinase domain 355 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4684 689 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Psa1g4684 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Psa1g4684 689 Gene3D - 25 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4684 Psa-Chr1 355534995 355538172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4684 24 577 Receptor kinase-like Gene Family AT4G04960 63.750 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa1g4684 Pkinase 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4684 - - gmx:100804391 1048.88