Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4628 ATGAACCTTGCTGAACATATTGCTTATGACACAATCATGGCAACTCTATCAATATCTCTCATAATTCTTGGCATCATCCTCTTCTTCGCTTGTAAAAAGAAACCAGTTGAATCAGAAGAAACACTTCCAGTGAAACACACGGCTCGTGCATACCCTTTAACAGAAATTGATGCTGCCACAAATGGCTTCAACCATAGAAGAATTGTCGGAAAAGGTCGTTTAGGAACAGTTTATGCAGGGAAACTAGAATCAGAAGAACTCGTAGCTGTGAAACGCATTCACCCTGTTCTTGTTTTAAGCAACGCAGGATTCGGTTTCTCATCAGTGATCAAATGGCTCTCTTTAGCTCATCACCCTAACGTTGTTCCCATAATAGGATTCTCAGAAGCACCAGGTGAAAGAATTATAGCGATGGAGTTTGTTCAAACCGCGAATTTGGAAATTTACTTGCATGAAAATCATGATGGAGTTTCTTCTTCACTTTTGGATTGGAACAAGAGGTTTAAGATTGCAGCTGGAGTAGCTAAAGGGCTTCAATATCTTCATGAAGTGGTAGCACCAAATATTATACATGGTTGTGTTAAGTCTTCTAATATTCTTATTGATGTTAATTTTTGTGCTAGGGTTTCTGATTATGGACTTAATTTTTTAGGGTTAGTTGAAAAAAGAGGGTTAATTGGTTATGTGGATGATGAATATTGGAAAGAAGGAATTAGGGGTGGAGGGGTTTGTAAGGAAAGTGATGTTTATGGGTTAGGGGTGATTTTGTTGGAGCTTTTGAGTGGAAGAGGGTGTGAGGGTGGATTATTGGTGAAATGGGCATTACCTTTGATTAAGGATATGAGATTTAGTGAAGTTTTGGATCCTAGGTTGATGATTCCTAGTGATATGAAAGCTATTGTTAGGTTAGCAAAAGTTGCTTTAGCTTGTGTTGGTAATTCAAGGAAATGTAGGCCTTGTGTGGATCATGTGGCAACCATTTTGAATGCTTTAGAGATGGAAGTTTGTTACTTATCAAATTAG 1023 0.3812 MNLAEHIAYDTIMATLSISLIILGIILFFACKKKPVESEETLPVKHTARAYPLTEIDAATNGFNHRRIVGKGRLGTVYAGKLESEELVAVKRIHPVLVLSNAGFGFSSVIKWLSLAHHPNVVPIIGFSEAPGERIIAMEFVQTANLEIYLHENHDGVSSSLLDWNKRFKIAAGVAKGLQYLHEVVAPNIIHGCVKSSNILIDVNFCARVSDYGLNFLGLVEKRGLIGYVDDEYWKEGIRGGGVCKESDVYGLGVILLELLSGRGCEGGLLVKWALPLIKDMRFSEVLDPRLMIPSDMKAIVRLAKVALACVGNSRKCRPCVDHVATILNALEMEVCYLSN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4628 340 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4628 340 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 2 336 - -
Psa1g4628 340 Gene3D Transferase(Phosphotransferase) domain 1 142 337 - -
Psa1g4628 340 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 336 - -
Psa1g4628 340 Gene3D Phosphorylase Kinase; domain 1 28 140 - -
Psa1g4628 340 Pfam Protein tyrosine and serine/threonine kinase 66 326 IPR001245 GO:0004672|GO:0006468
Psa1g4628 340 SUPERFAMILY Protein kinase-like (PK-like) 39 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4628 Psa-Chr1 352723547 352726517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4628 40 328 Receptor kinase-like Gene Family AT3G59420 38.079 1.44e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa1g4628 PK_Tyr_Ser-Thr 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4628 - - mtr:MTR_2g014650 591.267