Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4603 ATGGAACATCAACATAAACTGTTTCCTCTTCTGCTGTTACTTCTGTTCCAAGTTTTGATTGTTGCATCACAGACAGATAGTGGAGATTTTACTGCTCTTTCGTCTCTCATACAATCATGGAAAAACAAACCGTTAAATTGGGTTGGTTCTGATCCTTGTGGAAGTGATTGGGATGGAATTCGTTGCGCCAATTCGAGAATCATCGAACTGAAACTACCGGGGTTGAATTTGGAGGGAGAACTATCTTCAGCAATTCAGTCCTTATCTGAACTTGACACACTCGATCTTTCGTACAACGCAGGCATGACAGGAACGATTCCGAAGGAAATTGGGAATTTGAAAAACCTCAATTCCTTGGCATTGGTTAACTGTGGTTTCTCTGGCCCTATTCCTGATTCAATAGGATCTTTAAAAAAGCTGACCTTTTTAGCGCTGAATTCGAATAAGTTCAACGGAAACATTCCGCGCACTCTTGGAAATCTAGCCATCCTTGATTGGTTAGATCTTGATGATAACCAGCTGGAAGGGTCTATTCCTGTCTCTGATGGTCAAGGGCAGCCAGGTCTTGACATGCTCCTTAAGGCCCAACACTTTCATTTGGGGAACAATAAACTCTCAGGTCCAATACCGCTAACACTTTTTAACTCCAGCATGATTCTAGAACATGTGCTTTTCGACCACAATCAACTAACCGGCAGTATTCCTAGCAGTTTAAGCCTTCTGAGCAAAGTGGAAGTGGTACGCTTTGACAAGAATCGATTAAGCGGGAGAGTGCCTAACAGTTTGAACAATCTCGAAAAACTTAGCGAGATTTATTTATCTCACAATGAACTGAATGGCTCTCTGCCGGATTTTACTGGAATGACTCGTCTCACCTACGTGGATCTGAGTGACAATAATTTCAATTCTTCTGATATTCCTTCATGGGTTTATGCTTCTAGTCTCCCAGATCTGACGACAGTAATACTGAAGGACAACCAGCTCAGTGGCACATTAAATCTCAGCAGTGGCTACAGAAGAAGTCTGCAACTCATTGACTTGCAAAACAATGCTATTACCGACCTCGAGATGGGAAACCAAAAATTGAATTTCGACTTGAGATTGGGTCAAAACAAGATTTGTCTTGAAAATGGAGTTTCTAATGAGGTTTACTGCAAAGCTCCTCAAGTCATTCCCTCGTATTCGACACCAACGAATAATTGTCCAACTCCTTCATGCAGTAACAATCAAATTGCCAGCCCAAACTGTAAATGCGCATTTCCCTACATTGGAAATCTATCATCTAGAGCTTTTAGTTTCTCCAATTATAGTAACACGAGTTACTACGCGGAAATTGAGCAGTCGTTGATGAGTACTTTTCGAAAAGAAAATATTCCAGTGGATTCGGTTTCTCTTAGTAATCCTATCAAGGTTACATCTACTGATAATTTTCAGTTGACTCTTAATGTCTTCCCTTCTCAAGCCGATCGTTTCAATACCACTGGAGTTTCAACAGCTGCTTTTGTGCTTAGCAACCAAATTTACACGCCTCCAGCATTTTTCTCCCCTTACATCTTCATTGGTCTTAGCTATTCATATTATGGAGGAGAACCTAAGGGATCAAAGTCATCGAATACAGGCGCAATAATTGGTGCGGTAGTTGGTATATTGGTCTTTCTTGTACTGGCGATCCTTATAGGGCTATACATTATTCGCAAAAAAAGAACAAGATCTTCCGAGTTGAACCCTTTTGTAAACTGGGAACAGAACAAGAATAGTGGAGCTGCTCCGCAGTTGAAAGGAGCGCGATGGTTTTCATTTGATGAGATGAGGAAATACACCAACAATTTCGCAGAAGCCAACACTATTGGATCGGGCGGCTATGGACAGGTTTACCAAGGTGCTCTTCCCACCGGAGAATTGGTTGCCATCAAAAGGGCTGGAAAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTCGTTGGCTTCTGTTACGAGAAAGGCGAACAAATGCTCGTCTACGAGTATGTTCCAAATGGAACTTTAATGGACAGTCTTACAGGAAAATCTGGGATATGGATGGATTGGATAAGGAGGCTCAAAGTTACATTGGGTGCTGCCAGGGGTCTGACCTATCTACATGAACTTGCAGACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCCTACTTGATAATCACCTTGTCGCTAAAGTGGCTGATTTCGGTCTCTCCAAACTTCTTGTTGATAGCGATAGAGGCCATGTTACTACTCAAGTCAAAGGGACCATGGGATACTTGGATCCTGAATATTACATGACCCAACAATTGACTGAAAAGAGTGATGTATATAGCTTTGGAGTGCTAATGCTGGAACTAGCAACATCAAGAAAGCCAATAGAGCAAGGAAAATACATTGTAAGAGAGGTAATGAGGGTAATGGATACATCGAAAGATTTATACAACCTTCATTCGGTTCTTGATCAAAGTATACTGAAAGGGACAAGACCAAAAGGTTTAGAGAGGTATGTGGAACTTGCATTGAGGTGTGTGAAAGAATATGCAGCTGATAGACCTTCGATGGCCGAGGTTGCAAAAGAGATCGAGAGCATAATCGAGCTTGTTGGAGTGAACCCGAATTCTGAATCAACTTCAACAACAGAAACATATGAGGAAGCGGGTGCGGGGAATGGTAAGCATCCTTATGTGAATGATGGTGAATTTGAATATAGTGGAATGTTTCCAACAATAAGGGTAGATCCTCAATGA 2802 0.4151 MEHQHKLFPLLLLLLFQVLIVASQTDSGDFTALSSLIQSWKNKPLNWVGSDPCGSDWDGIRCANSRIIELKLPGLNLEGELSSAIQSLSELDTLDLSYNAGMTGTIPKEIGNLKNLNSLALVNCGFSGPIPDSIGSLKKLTFLALNSNKFNGNIPRTLGNLAILDWLDLDDNQLEGSIPVSDGQGQPGLDMLLKAQHFHLGNNKLSGPIPLTLFNSSMILEHVLFDHNQLTGSIPSSLSLLSKVEVVRFDKNRLSGRVPNSLNNLEKLSEIYLSHNELNGSLPDFTGMTRLTYVDLSDNNFNSSDIPSWVYASSLPDLTTVILKDNQLSGTLNLSSGYRRSLQLIDLQNNAITDLEMGNQKLNFDLRLGQNKICLENGVSNEVYCKAPQVIPSYSTPTNNCPTPSCSNNQIASPNCKCAFPYIGNLSSRAFSFSNYSNTSYYAEIEQSLMSTFRKENIPVDSVSLSNPIKVTSTDNFQLTLNVFPSQADRFNTTGVSTAAFVLSNQIYTPPAFFSPYIFIGLSYSYYGGEPKGSKSSNTGAIIGAVVGILVFLVLAILIGLYIIRKKRTRSSELNPFVNWEQNKNSGAAPQLKGARWFSFDEMRKYTNNFAEANTIGSGGYGQVYQGALPTGELVAIKRAGKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCYEKGEQMLVYEYVPNGTLMDSLTGKSGIWMDWIRRLKVTLGAARGLTYLHELADPPIIHRDIKSSNILLDNHLVAKVADFGLSKLLVDSDRGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATSRKPIEQGKYIVREVMRVMDTSKDLYNLHSVLDQSILKGTRPKGLERYVELALRCVKEYAADRPSMAEVAKEIESIIELVGVNPNSESTSTTETYEEAGAGNGKHPYVNDGEFEYSGMFPTIRVDPQ* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4603 933 ProSiteProfiles Protein kinase domain profile. 610 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4603 933 SUPERFAMILY L domain-like 45 362 - -
Psa1g4603 933 Gene3D - 529 570 - -
Psa1g4603 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Psa1g4603 933 Gene3D Phosphorylase Kinase; domain 1 580 685 - -
Psa1g4603 933 Gene3D Ribonuclease Inhibitor 183 283 IPR032675 -
Psa1g4603 933 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Psa1g4603 933 SUPERFAMILY Protein kinase-like (PK-like) 596 891 IPR011009 -
Psa1g4603 933 SMART serkin_6 610 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4603 933 PANTHER RECEPTOR-LIKE PROTEIN 55 2 915 - -
Psa1g4603 933 Gene3D Ribonuclease Inhibitor 284 391 IPR032675 -
Psa1g4603 933 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 915 - -
Psa1g4603 933 Gene3D Transferase(Phosphotransferase) domain 1 686 902 - -
Psa1g4603 933 Pfam Protein kinase domain 612 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4603 933 CDD TM_EGFR-like 535 568 - -
Psa1g4603 933 ProSitePatterns Protein kinases ATP-binding region signature. 616 642 IPR017441 GO:0005524
Psa1g4603 933 CDD STKc_IRAK 616 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4603 Psa-Chr1 351790201 351794898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4603 10 933 Receptor kinase-like Gene Family AT5G49760 51.153 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Psa1g4603 Pkinase 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4603 - - mtr:MTR_2g014960 1588.93